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    1. Erkip, A; Erman, B; Seok, C; Dill, K
      Parameter optimization for the Gaussian model of protein folding

      POLYMER
    2. Moralejo, FJ; Watson, AJ; Jeenes, DJ; Archer, DB; Martin, JF
      A defined level of protein disulfide isomerase expression is required for optimal secretion of thaumatin by Aspergillus awamori

      MOLECULAR GENETICS AND GENOMICS
    3. Shen, YQ; Kuznetsov, SV; Ansari, A
      Loop dependence of the dynamics of DNA hairpins

      JOURNAL OF PHYSICAL CHEMISTRY B
    4. Bushmarina, NA; Kuznetsova, IM; Biktashev, AG; Turoverov, KK; Uversky, VN
      Partially folded conformations in the folding pathway of bovine carbonic anhydrase II: A fluorescence spectroscopic analysis

      CHEMBIOCHEM
    5. Volk, M
      Fast initiation of peptide and protein folding processes

      EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
    6. Gilis, D; Rooman, M
      Ab initio structure predictions using a hierarchical approach applied to 434 cro and the Drosophila homeodomain

      THEORETICAL CHEMISTRY ACCOUNTS
    7. Schaffitzel, E; Rudiger, S; Bukau, B; Deuerling, E
      Functional dissection of Trigger factor and DnaK: Interactions with nascent polypeptides and thermally denatured proteins

      BIOLOGICAL CHEMISTRY
    8. Lamarine, M; Mornon, JP; Berezovsky, IN; Chomilier, J
      Distribution of tightened end fragments of globular proteins statisticallymatches that of topohydrophobic positions: towards an efficient punctuation of protein folding?

      CELLULAR AND MOLECULAR LIFE SCIENCES
    9. Brouillette, CG; Anantharamaiah, GM; Engler, JA; Borhani, DW
      Structural models of human apolipoprotein A-I: a critical analysis and review

      BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
    10. Kumar, C; Chaudhari, A
      Chemical chaperones: influence of carboxylate orientation on the refoldingof glucose oxidase

      MICROPOROUS AND MESOPOROUS MATERIALS
    11. Purkiss, A; Skoulaikis, S; Goodfellow, JM
      The protein-solvent interface: a big splash

      PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
    12. Kramer, G; Ramachandiran, V; Hardesty, B
      Cotranslational folding - omnia mea mecum porto?

      INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
    13. Clark, JI
      Therapeutic applications of heat shock proteins and molecular chaperones

      EXPERT OPINION ON THERAPEUTIC PATENTS
    14. Leandro, P; Lechner, MC; de Almeida, IT; Konecki, D
      Glycerol increases the yield and activity of human phenylalanine hydroxylase mutant enzymes produced in a prokaryotic expression system

      MOLECULAR GENETICS AND METABOLISM
    15. Torshin, IY
      Clustering amino acid contents of protein domains: Biochemical functions of proteins and implications for origin of biological macromolecules

      FRONTIERS IN BIOSCIENCE
    16. Macario, AJL; de Macario, EC
      The molecular chaperone system and other anti-stress mechanisms in archaea

      FRONTIERS IN BIOSCIENCE
    17. Kroncke, KD; Haase, H; Beyersmann, D; Kolb-Bachofen, V; Hayer-Hartl, MK
      Nitric oxide inhibits the cochaperone activity of the RING finger-like protein DnaJ

      NITRIC OXIDE-BIOLOGY AND CHEMISTRY
    18. Wigley, WC; Stidham, RD; Smith, NM; Hunt, JF; Thomas, PJ
      Protein solubility and folding monitored in vivo by structural complementation of a genetic marker protein

      NATURE BIOTECHNOLOGY
    19. Grandori, R; Matecko, I; Mayr, P; Muller, N
      Probing protein stabilization by glycerol using electrospray mass spectrometry

      JOURNAL OF MASS SPECTROMETRY
    20. Grell, D; Richardson, JS; Mutter, M
      Protein design and folding: Template trapping of self-assembled helical bundles

      JOURNAL OF PEPTIDE SCIENCE
    21. Lee, LW; Wang, JS
      Flat histogram simulation of lattice polymer systems - art. no. 056112

      PHYSICAL REVIEW E
    22. Beck, C; Siemens, X
      Unfolding rates for the diffusion-collision model - art. no. 052902

      PHYSICAL REVIEW E
    23. De los Rios, P; Caldarelli, G
      Cold and warm swelling of hydrophobic polymers - art. no. 031802

      PHYSICAL REVIEW E
    24. Gregersen, N; Andresen, BS; Corydon, M; Corydon, TJ; Olsen, RKJ; Bolund, L; Bross, P
      Mutation analysis in mitochondrial fatty acid oxidation defects: Exemplified by acyl-CoA dehydrogenase deficiencies, with special focus on genotype-phenotype relationship

      HUMAN MUTATION
    25. Bonneau, R; Baker, D
      Ab initio protein structure prediction: Progress and prospects

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    26. Gutsche, I; Holzinger, J; Rauh, N; Baumeister, W; May, RP
      ATP-induced structural change of the thermosome is temperature-dependent

      JOURNAL OF STRUCTURAL BIOLOGY
    27. McCormack, EA; Rohman, MJ; Willison, KR
      Mutational screen identifies critical amino acid residues of beta-actin mediating interaction between its folding intermediates and eukaryotic cytosolic chaperonin CCT

      JOURNAL OF STRUCTURAL BIOLOGY
    28. McCormack, EA; Llorca, O; Carrascosa, JL; Valpuesta, JM; Willison, KR
      Point mutations in a hinge linking the small and large domains of beta-actin result in trapped folding intermediates bound to cytosolic chaperonin CCT

      JOURNAL OF STRUCTURAL BIOLOGY
    29. Nomine, Y; Ristriani, T; Laurent, C; Lefevre, JF; Weiss, E; Trave, G
      Formation of soluble inclusion bodies by HPV E6 oncoprotein fused to maltose-binding protein

      PROTEIN EXPRESSION AND PURIFICATION
    30. Geng, XD; Regnier, FE; Wang, Y
      Recent developments of the stoichiometric displacement model for separation processes

      CHINESE SCIENCE BULLETIN
    31. Fowler, SB; Clarke, J
      Mapping the folding pathway of an immunoglobulin domain: Structural detailfrom phi value analysis and movement of the transition state

      STRUCTURE
    32. Carrascosa, JL; Llorca, O; Valpuesta, JM
      Structural comparison of prokaryotic and eukaryotic chaperonins

      MICRON
    33. Helenius, A
      Quality control in the secretory assembly line

      PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES
    34. Chen, PY; Lin, CK; Lee, CT; Jan, H; Chan, SI
      Effects of turn residues in directing the formation of the beta-sheet and in the stability of the beta-sheet

      PROTEIN SCIENCE
    35. Frankenberg, RJ; Hsu, TS; Yakota, H; Kim, R; Clark, DS
      Chemical denaturation and elevated folding temperatures are required for wild-type activity and stability of recombinant Methanococcus jannaschii 20Sproteasome

      PROTEIN SCIENCE
    36. Korepanova, A; Douglas, C; Leyngold, I; Logan, TM
      N-terminal extension changes the folding mechanism of the FK506-binding protein

      PROTEIN SCIENCE
    37. Gianni, S; Brunori, M; Travaglini-Allocatelli, C
      Refolding kinetics of cytochrome c(551) reveals a mechansitic difference between urea and guanidine

      PROTEIN SCIENCE
    38. Cochran, DAE; Doig, AJ
      Effect of the N2 residue on the stability of the alpha-helix for all 20 amino acids

      PROTEIN SCIENCE
    39. Ramirez-Alvarado, M; Blanco, FJ; Serrano, L
      Elongation of the BH8 beta-hairpin peptide: Electrostatic interactions in beta-hairpin formation and stability

      PROTEIN SCIENCE
    40. Macdonald, JR; Johnson, WC
      Environmental features are important in determining protein secondary structure

      PROTEIN SCIENCE
    41. Reader, JS; Van Nuland, NAJ; Thompson, GS; Ferguson, SJ; Dobson, CM; Radford, SE
      A partially folded intermediate species of the beta-sheet protein apo-pseudoazurin is trapped during proline-limited folding

      PROTEIN SCIENCE
    42. Jaravine, VA; Alexandrescu, AT; Grzesiek, S
      Observation of the closing of individual hydrogen bonds during TFE-inducedhelix formation in a peptide

      PROTEIN SCIENCE
    43. Bai, YW; Chung, J; Dyson, HJ; Wright, PE
      Structural and dynamic characterization of an unfolded state of poplar apo-plastocyanin formed under nondenaturing conditions

      PROTEIN SCIENCE
    44. Torrent, J; Rubens, P; Ribo, M; Heremans, K; Vilanova, M
      Pressure versus temperature unfolding of ribonuclease A: An FTIR spectroscopic characterization of 10 variants at the carboxy-terminal site

      PROTEIN SCIENCE
    45. Harrison, PM; Chan, HS; Prusiner, SB; Cohen, FE
      Conformational propagation with prion-like characteristics in a simple model of protein folding

      PROTEIN SCIENCE
    46. Hackeng, TM; Rosing, J; Spronk, HMH; Vermeer, G
      Total chemical synthesis of human matrix Gla protein

      PROTEIN SCIENCE
    47. Cochran, DAE; Penel, S; Doig, AJ
      Effect of the N1 residue on the stability of the alpha-helix for all 20 amino acids

      PROTEIN SCIENCE
    48. Fox, JD; Kapust, RB; Waugh, DS
      Single amino acid substitutions on the surface of Escherichia coli maltose-binding protein can have a profound impact on the solubility of fusion proteins

      PROTEIN SCIENCE
    49. Xing, YN; Williams, C; Campbell, RK; Cook, S; Knoppers, M; Addona, T; Altarocca, V; Moyle, WR
      Threading of a glycosylated protein loop through a protein hole: Implications for combination of human chorionic gonadotropin subunits

      PROTEIN SCIENCE
    50. Eggers, DK; Valentine, JS
      Molecular confinement influences protein structure and enhances thermal protein stability

      PROTEIN SCIENCE
    51. Haase-Pettingell, C; Betts, S; Raso, SW; Stuart, L; Robinson, A; King, J
      Role for cysteine residues in the in vivo folding and assembly of the phage P22 tailspike

      PROTEIN SCIENCE
    52. Kafri, G; Willison, KR; Horovitz, A
      Nested allosteric interactions in the cytoplasmic chaperonin containing TCP-1

      PROTEIN SCIENCE
    53. Courtenay, ES; Capp, MW; Record, MT
      Thermodynamics of interactions of urea and guanidinium salts with protein surface: Relationship between solute effects on protein processes and changes in water-accessible surface area

      PROTEIN SCIENCE
    54. Dutta, K; Alexandrov, A; Huang, H; Pascal, SM
      pH-induced folding of an apoptotic coiled coil

      PROTEIN SCIENCE
    55. Ojennus, DD; Fleissner, MR; Wuttke, DS
      Reconstitution of a native-like SH2 domain from disordered peptide fragments examined by multidimensional heteronuclear NMR

      PROTEIN SCIENCE
    56. Morar, AS; Olteanu, A; Young, GB; Pielak, GJ
      Solvent-induced collapse of alpha-synuclein and acid-denatured cytochrome c

      PROTEIN SCIENCE
    57. Hayward, S
      Peptide-plane flipping in proteins

      PROTEIN SCIENCE
    58. Greene, LH; Chrysina, ED; Irons, LI; Papageorgiou, AC; Acharya, KR; Brew, K
      Role of conserved residues in structure and stability: Tryptophans of human serum retinol-binding protein, a model for the lipocalin superfamily

      PROTEIN SCIENCE
    59. Zhu, H; Celinski, SA; Scholtz, JM; Hu, JC
      An engineered leucine zipper a position mutant with an unusual three-stateunfolding pathway

      PROTEIN SCIENCE
    60. Bai, P; Song, JX; Luo, L; Peng, ZY
      A model of dynamic side-chain-side-chain interactions in the alpha-lactalbumin molten globule

      PROTEIN SCIENCE
    61. Minard, P; Scalley-Kim, M; Watters, A; Baker, D
      A "loop entropy reduction" phage-display selection for folded amino acid sequences

      PROTEIN SCIENCE
    62. Sham, YY; Ma, BY; Tsai, CJ; Nussinov, R
      Molecular dynamics simulation of Escherichia coli dihydrofolate reductase and its protein fragments: Relative stabilities in experiment and simulations

      PROTEIN SCIENCE
    63. Demchenko, AP
      Recognition between flexible protein molecules: induced and assisted folding

      JOURNAL OF MOLECULAR RECOGNITION
    64. Ochsenbein, F; Guerois, R; Neumann, JM; Sanson, A; Guittet, E; van Heijenoort, C
      N-15 NMR relaxation as a probe for helical intrinsic propensity: The case of the unfolded D2 domain of annexin I

      JOURNAL OF BIOMOLECULAR NMR
    65. Fitter, J; Herrmann, R; Hauss, T; Lechner, RE; Dencher, NA
      Dynamical properties of alpha-amylase in the folded and unfolded state: the role of thermal equilibrium fluctuations for conformational entropy and protein stabilisation

      PHYSICA B
    66. Berezovsky, IN; Kirzhner, VM; Kirzhner, A; Trifonov, EN
      Protein folding: Looping from hydrophobic nuclei

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    67. Andrew, CD; Penel, S; Jones, GR; Doig, AJ
      Stabilizing nonpolar/polar side-chain interactions in the alpha-helix

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    68. Verkhivker, GM; Bouzida, D; Gehlhaar, DK; Rejto, PA; Schaffer, L; Arthurs, S; Colson, AB; Freer, ST; Larson, V; Luty, BA; Marrone, T; Rose, PW
      Hierarchy of simulation models in predicting molecular recognition mechanisms from the binding energy landscapes: Structural analysis of the peptide complexes with SH2 domains

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    69. Forcellino, F; Derreumaux, P
      Computer simulations aimed at structure prediction of supersecondary motifs in proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    70. Krueger, BP; Kollman, PA
      Molecular dynamics simulations of a highly charged peptide from an SH3 domain: Possible sequence-function relationship

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    71. Laurents, D; Perez-Canadillas, JM; Santoro, J; Rico, M; Schell, D; Pace, CN; Bruix, M
      Solution structure and dynamics of ribonuclease Sa

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    72. Tcherkasskaya, O; Uversky, VN
      Denatured collapsed states in protein folding: Example of apomyoglobin

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    73. Smith, AV; Hall, CK
      Assembly of a tetrameric alpha-helical bundle: Computer simulations on an intermediate-resolution protein model

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    74. Bastolla, U; Farwer, J; Knapp, EW; Vendruscolo, M
      How to guarantee optimal stability for most representative structures in the protein data bank

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    75. Cieplak, M; Hoang, TX
      Kinetic nonoptimality and vibrational stability of proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    76. Torshin, IY; Harrison, RW
      Charge centers and formation of the protein folding core

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    77. Klimov, DK; Thirumalai, D
      Multiple protein folding nuclei and the transition state ensemble in two-state proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    78. Langdon, GM; Jimenez, MA; Genzor, CG; Maldonado, S; Sancho, J; Rico, M
      Anabaena apoflavodoxin hydrogen exchange: On the stable exchange core of the alpha/beta(21345) flavodoxin-like family

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    79. Pan, XM
      Multiple linear regression for protein secondary structure prediction

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    80. Nakamura, HK; Sasai, M
      Population analyses of kinetic partitioning in protein folding

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    81. Burns, LL; Ropson, IJ
      Folding of intracellular retinol and retinoic acid binding proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    82. Kannan, N; Selvaraj, S; Gromiha, MM; Vishveshwara, S
      Clusters in alpha/beta barrel proteins: Implications for protein structure, function, and folding: A graph theoretical approach

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    83. Sullivan, DC; Kuntz, ID
      Conformation spaces of proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    84. Kenig, M; Jerala, R; Kroon-Zitko, L; Turk, V; Zerovnik, E
      Major differences in stability and dimerization properties of two chimericmutants of human stefins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    85. Garcia, AE; Sanbonmatsu, KY
      Exploring the energy landscape of a beta hairpin in explicit solvent

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    86. Micheletti, C; Seno, F; Banavar, JR; Maritan, A
      Learning effective amino acid interactions through iterative stochastic techniques

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    87. Reddy, BVB; Li, WW; Shindyalov, IN; Bourne, PE
      Conserved key amino acid positions (CKAAPs) derived from the analysis of common substructures in proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    88. Gilis, D; Rooman, M
      Identification and ab initio simulations of early folding unit in proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    89. Massi, F; Straub, JE
      Energy landscape theory for Alzheimer's amyloid beta-peptide fibril elongation

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    90. Demarest, SJ; Horng, JC; Raleigh, DP
      A protein dissection study demonstrates that two specific hydrophobic clusters play a key role in stabilizing the core structure of the molten globule state of human alpha-lactalbumin

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    91. Webb, TI; Morris, GE
      Structure of an intermediate in the unfolding of creatine kinase

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    92. Yoda, T; Saito, M; Arai, M; Horii, K; Tsumoto, K; Matsushima, M; Kumagai, I; Kuwajima, K
      Folding-unfolding of goat alpha-lactalbumin studied by stopped-flow circular dichroism and molecular dynamics simulations

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    93. Nakanishi, H; Nakayama, K; Yokota, A; Tachikawa, H; Takahashi, N; Jigami, Y
      Hut1 proteins identified in Saccharomyces cerevisiae and Schizosaccharomyces pombe are functional homologues involved in the protein-folding process at the endoplasmic reticulum

      YEAST
    94. Sacchetti, A; Cappetti, V; Marra, P; Dell'Arciprete, R; El Sewedy, T; Crescenzi, C; Alberti, S
      Green fluorescent protein variants fold differentially in prokaryotic and eukaryotic cells

      JOURNAL OF CELLULAR BIOCHEMISTRY
    95. Swaan, PW; Knoell, DL; Helsper, F; Wewers, MD
      Sequential processing of human ProIL-1 beta by caspase-1 and subsequent folding determined by a combined in vitro and in silico approach

      PHARMACEUTICAL RESEARCH
    96. Fernandez, A; Colubri, A; Appignanesi, G; Burastero, T
      Coarse semiempirical solution to the protein folding problem

      PHYSICA A
    97. Alves, NA; Hansmann, UHE
      Yang-Lee zeros and the helix-coil transition in a continuum model of polyalanine

      PHYSICA A
    98. Bakk, A; Hansen, A; Sneppen, K
      Protein model exhibiting three folding transitions

      PHYSICA A
    99. Fernandez, A
      Protein folding cooperativity in the correlated lattice

      PHYSICS LETTERS A
    100. Areas, EPG; Cassiano, MM
      Folding interpenetration in a gliadin model: the role of the characteristic octapeptide motif

      BIOPHYSICAL CHEMISTRY


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Documento generato il 19/02/20 alle ore 03:09:26