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La ricerca find articoli where soggetti phrase all words 'essential dynamics' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 41 riferimenti
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    1. Howe, PWA
      Principal components analysis of protein structure ensembles calculated using NMR data

      JOURNAL OF BIOMOLECULAR NMR
    2. Soares, TA; Miller, JH; Straatsma, TP
      Revisiting the structural flexibility of the complex p21(ras)-GTP: The catalytic conformation of the molecular switch II

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    3. Schieborr, U; Ruterjans, H
      Bias-free separation of internal and overall motion of biomolecules

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    4. Arcangeli, C; Bizzarri, AR; Cannistraro, S
      Molecular dynamics simulation and essential dynamics study of mutated plastocyanin: structural, dynamical and functional effects of a disulfide bridge insertion at the protein surface

      BIOPHYSICAL CHEMISTRY
    5. Arcangeli, C; Bizzarri, AR; Cannistraro, S
      Concerted motions in copper plastocyanin and azurin: an essential dynamicsstudy

      BIOPHYSICAL CHEMISTRY
    6. Zhang, ZY; Zhu, YJ; Shi, YY
      Molecular dynamics simulations of urea and thermal-induced denaturation ofS-peptide analogue

      BIOPHYSICAL CHEMISTRY
    7. Labrou, NE; Mello, LV; Clonis, YD
      Functional and structural roles of the glutathione-binding residues in maize (Zea mays) glutathione S-transferase I

      BIOCHEMICAL JOURNAL
    8. Watts, CR; Toth, G; Murphy, RF; Lovas, S
      Domain movement in the epidermal growth factor family of peptides

      JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM
    9. Roccatano, D; Mark, AE; Hayward, S
      Investigation of the mechanism of domain closure in citrate synthase by molecular dynamics simulation

      JOURNAL OF MOLECULAR BIOLOGY
    10. Lins, RD; Straatsma, TP
      Computer simulation of the rough lipopolysaccharide membrane of Pseudomonas aeruginosa

      BIOPHYSICAL JOURNAL
    11. Van Aalten, DMF; Crielaard, W; Hellingwerf, KJ; Joshua-Tor, L
      Conformational substates in different crystal forms of the photoactive yellow protein - Correlation with theoretical and experimental flexibility

      PROTEIN SCIENCE
    12. Abseher, R; Nilges, M
      Efficient sampling in collective coordinate space

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    13. Deuflhard, P; Huisinga, W; Fischer, A; Schutte, C
      Identification of almost invariant aggregates in reversible nearly uncoupled Markov chains

      LINEAR ALGEBRA AND ITS APPLICATIONS
    14. Lins, RD; Straatsma, TP; Briggs, JM
      Similarities in the HIV-1 and ASV integrase active sites upon metal cofactor binding

      BIOPOLYMERS
    15. Kolafa, J; Perram, JW; Bywater, RP
      Essential motions and energetic contributions of individual residues in a peptide bound to an SH3 domain

      BIOPHYSICAL JOURNAL
    16. van Aalten, DMF; Chong, CR; Joshua-Tor, L
      Crystal structure of carboxypeptidase A complexed with D-cysteine at 1.75 angstrom - Inhibitor-induced conformational changes

      BIOCHEMISTRY
    17. Roccatano, D; Amadei, A; Di Nola, A; Berendsen, HJC
      A molecular dynamics study of the 41-56 beta-hairpin from B1 domain of protein G

      PROTEIN SCIENCE
    18. Frimurer, TM; Peters, GH; Sorensen, MD; Led, JJ; Olsen, OH
      Assignment of side-chain conformation using adiabatic energy mapping, freeenergy perturbation, and molecular dynamic simulations

      PROTEIN SCIENCE
    19. Chau, PL; van Aalten, DMF; Bywater, RP; Findlay, JBC
      Functional concerted motions in the bovine serum retinol-binding protein

      JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
    20. Kazmierkiewicz, R; Czaplewski, C; Lammek, B; Ciarkowski, J
      Essential dynamics/factor analysis for the interpretation of molecular dynamics trajectories

      JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
    21. Kouwijzer, MLCE; Berendsen, HJC; Grootenhuis, PDJ
      Computer simulations of the dynamics of human choriogonadotropin and its alpha subunit

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    22. Stella, L; Di Iorio, EE; Nicotra, M; Ricci, G
      Molecular dynamics simulations of human glutathione transferase P1-1: Conformational fluctuations of the apo-structure

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    23. Amadei, A; Ceruso, MA; Di Nola, A
      On the convergence of the conformational coordinates basis set obtained bythe essential dynamics analysis of proteins' molecular dynamics simulations

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    24. Amadei, A; de Groot, BL; Ceruso, MA; Paci, M; Di Nola, A; Berendsen, HJC
      A kinetic model for the internal motions of proteins: Diffusion between multiple harmonic wells

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    25. Peters, GH; Bywater, RP
      Computational analysis of chain flexibility and fluctuations in Rhizomucormiehei lipase

      PROTEIN ENGINEERING
    26. Horstink, LM; Abseher, R; Nilges, M; Hilbers, CW
      Functionally important correlated motions in the single-stranded DNA binding protein encoded by filamentous phage Pf3

      JOURNAL OF MOLECULAR BIOLOGY
    27. de Groot, BL; Vriend, G; Berendsen, HJC
      Conformational changes in the chaperonin GroEL: New insights into the allosteric mechanism

      JOURNAL OF MOLECULAR BIOLOGY
    28. CREVELD LD; AMADEI A; VANSCHAIK RC; PEPERMANS HAM; DEVLIEG J; BERENDSEN HJC
      IDENTIFICATION OF FUNCTIONAL AND UNFOLDING MOTIONS OF CUTINASE AS OBTAINED FROM MOLECULAR-DYNAMICS COMPUTER-SIMULATIONS

      Proteins
    29. ABSEHER R; HORSTINK L; HILBERS CW; NILGES M
      ESSENTIAL SPACES DEFINED BY NMR STRUCTURE ENSEMBLES AND MOLECULAR-DYNAMICS SIMULATION SHOW SIGNIFICANT OVERLAP

      Proteins
    30. DEGROOT BL; HAYWARD S; VANAALTEN DMF; AMADEI A; BERENDSEN HJC
      DOMAIN MOTIONS IN BACTERIOPHAGE-T4 LYSOZYME - A COMPARISON BETWEEN MOLECULAR-DYNAMICS AND CRYSTALLOGRAPHIC DATA

      Proteins
    31. VANAALTEN DMF; HOFF WD; FINDLAY JBC; CRIELAARD W; HELLINGWERF KJ
      CONCERTED MOTIONS IN THE PHOTOACTIVE YELLOW PROTEIN

      Protein engineering (Print)
    32. ABSEHER R; NILGES M
      ARE THERE NONTRIVIAL DYNAMIC CROSS-CORRELATIONS IN PROTEINS

      Journal of Molecular Biology
    33. VELTMAN OR; EIJSINK VGH; VRIEND G; DEKREIJ A; VENEMA G; VANDENBURG B
      PROBING CATALYTIC HINGE BENDING MOTIONS IN THERMOLYSIN-LIKE PROTEASESBY GLYCINE-]ALANINE MUTATIONS

      Biochemistry
    34. DEGROOT BL; VANAALTEN DMF; SCHEEK RM; AMADEI A; VRIEND G; BERENDSEN HJC
      PREDICTION OF PROTEIN CONFORMATIONAL FREEDOM FROM DISTANCE CONSTRAINTS

      Proteins
    35. HAYWARD S; KITAO A; BERENDSEN HJC
      MODEL-FREE METHODS OF ANALYZING DOMAIN MOTIONS IN PROTEINS FROM SIMULATION - A COMPARISON OF NORMAL-MODE ANALYSIS AND MOLECULAR-DYNAMICS SIMULATION OF LYSOZYME

      Proteins
    36. MELLO LV; VANAALTEN DMF; FINDLAY JBC
      COMPARISON OF RAS-P21 BOUND TO GDP AND GTP - DIFFERENCES IN PROTEIN AND LIGAND DYNAMICS

      Protein engineering
    37. VANAALTEN DMF; JONES PC; DESOUSA M; FINDLAY JBC
      ENGINEERING PROTEIN MECHANICS - INHIBITION OF CONCERTED MOTIONS OF THE CELLULAR RETINOL-BINDING PROTEIN BY SITE-DIRECTED MUTAGENESIS

      Protein engineering
    38. VANDERSPOEL D; DEGROOT BL; HAYWARD S; BERENDSEN HJC; VOGEL HJ
      BENDING OF THE CALMODULIN CENTRAL HELIX - A THEORETICAL-STUDY

      Protein science
    39. DEGROOT BL; AMADEI A; SCHEEK RM; VANNULAND NAJ; BERENDSEN HJC
      AN EXTENDED SAMPLING OF THE CONFIGURATIONAL SPACE OF HPR FROM ESCHERICHIA-COLI

      Proteins
    40. SCHEEK RM; VANNULAND NAJ; DEGROOT BL; AMADEI A
      STRUCTURE FROM NMR AND MOLECULAR-DYNAMICS - DISTANCE RESTRAINING INHIBITS MOTION IN THE ESSENTIAL SUBSPACE

      Journal of biomolecular NMR
    41. VANAALTEN DMF; FINDLAY JBC; AMADEI A; BERENDSEN HJC
      ESSENTIAL DYNAMICS OF THE CELLULAR RETINOL-BINDING PROTEIN - EVIDENCEFOR LIGAND-INDUCED CONFORMATIONAL-CHANGES

      Protein engineering


ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 25/01/21 alle ore 18:43:46