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La ricerca find articoli where soggetti phrase all words 'codon usage' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 659 riferimenti
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    1. Konu, O; Li, MD
      Correlations between mRNA expression levels and GC contents of coding and untranslated regions of genes in rodents

      JOURNAL OF MOLECULAR EVOLUTION
    2. Dobrindt, U; Hacker, J
      Regulation of the tRNA(5)(Leu)-encoding gene leuX that is associated with a pathogenicity island in the uropathogenic Escherichia coli strain 536

      MOLECULAR GENETICS AND GENOMICS
    3. Levy, DD; Cebula, TA
      Fidelity of replication of repetitive DNA in mutS and repair proficient Escherichia coli

      MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
    4. Pereira, Y; Chambert, R; Leloup, L; Daguer, JP; Petit-Glatron, MF
      Transcripts of the genes sacB, amyE, sacC and csn expressed in Bacillus subtilis under the control of the 5 ' untranslated sacR region display different stabilities that can be modulated

      MICROBIOLOGY-SGM
    5. Albalat, R; Arenas, C; Mestres, F
      A statistical analysis of nucleotide substitutions in the Drosophila Adh region reflects irregularities in molecular clocks

      GENES & GENETIC SYSTEMS
    6. Fukunishi, Y; Hayashizaki, Y
      Amino acid translation program for full-length cDNA sequences with frameshift errors

      PHYSIOLOGICAL GENOMICS
    7. Friedman, R; Hughes, AL
      Gene duplication and the structure of eukaryotic genomes

      GENOME RESEARCH
    8. Brocchieri, L
      Low-complexity regions in Plasmodium proteins: In search of a function

      GENOME RESEARCH
    9. Sanchez, C; Du, LC; Edwards, DJ; Toney, MD; Shen, B
      Cloning and characterization of a phosphopantetheinyl transferase from Streptomyces verticillus ATCC15003, the producer of the hybrid peptide-polyketide antitumor drug bleomycin

      CHEMISTRY & BIOLOGY
    10. Searls, DB
      From Jabberwocky to genome: Lewis Carroll and computational biology

      JOURNAL OF COMPUTATIONAL BIOLOGY
    11. Lawrence, JG
      Catalyzing bacterial speciation: Correlating lateral transfer with geneticheadroom

      SYSTEMATIC BIOLOGY
    12. Kaeppler, HF; Carlson, AR; Menon, GK
      Routine utilization of green fluorescent protein as a visual selectable marker for cereal transformation

      IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT
    13. Levy, R; Weiss, R; Chen, G; Iverson, BL; Georgiou, G
      Production of correctly folded Fab antibody fragment in the cytoplasm of Escherichia coli trxB gor mutants via the coexpression of molecular chaperones

      PROTEIN EXPRESSION AND PURIFICATION
    14. Hernandez, A; Copa-Patino, JL; Soliveri, J
      xln23 from Streptomyces chattanoogensis UAH23 encodes a putative enzyme with separate xylanase and arabinofuranosidase catalytic domains

      DNA SEQUENCE
    15. Whitney, SM; Andrews, TJ
      The gene for the ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco)small subunit relocated to the plastid genome of tobacco directs the synthesis of small subunits that assemble into Rubisco

      PLANT CELL
    16. Massaer, M; Mazzu, P; Haumont, M; Magi, M; Daminet, V; Bollen, A; Jacquet, A
      High-level expression in mammalian cells of recombinant house dust mite allergen ProDer p 1 with optimized codon usage

      INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY
    17. Becker, WM; Kleber-Janke, T; Lepp, U
      Four novel recombinant peanut allergens: More information, more problems

      INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY
    18. Akashi, H
      Gene expression and molecular evolution

      CURRENT OPINION IN GENETICS & DEVELOPMENT
    19. Takano, E; Chakraburtty, R; Nihira, T; Yamada, Y; Bibb, MJ
      A complex role for the gamma-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor A3(2)

      MOLECULAR MICROBIOLOGY
    20. Gamulin, V; Peden, JF; Muller, IM; Muller, WEG
      Codon usage in the siliceous sponge Geodia cydonium: highly expressed genes in the simplest multicellular animals prefer C- and G-ending codons

      JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH
    21. Bregeon, D; Colot, V; Radman, M; Taddei, F
      Translational misreading: a tRNA modification counteracts a+2 ribosomal frameshift

      GENES & DEVELOPMENT
    22. Zhang, YJ; Jin, NY; Jiang, WZ; Zhu, XJ; Shen, JC
      Cloning and expression of the external-glycoprotein gene mutant from HIV-2in the methylotrophic yeast Pichia pastoris and identification of the glycoprotein

      BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY
    23. Musto, H; Cruveiller, W; D'Onofrio, G; Romero, H; Bernardi, G
      Translational selection on codon usage in Xenopus laevis

      MOLECULAR BIOLOGY AND EVOLUTION
    24. Helfenbein, KG; Brown, WM; Boore, JL
      The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa

      MOLECULAR BIOLOGY AND EVOLUTION
    25. Rocha, EPC; Danchin, A
      Ongoing evolution of strand composition in bacterial genomes

      MOLECULAR BIOLOGY AND EVOLUTION
    26. Guindon, S; Perriere, G
      Intragenomic base content variation is a potential source of biases when searching for horizontally transferred genes

      MOLECULAR BIOLOGY AND EVOLUTION
    27. Begun, DJ
      The frequency distribution of nucleotide variation in Drosophila simulans

      MOLECULAR BIOLOGY AND EVOLUTION
    28. Fullerton, SM; Carvalho, AB; Clark, AG
      Local rates of recombination are positively correlated with GC content in the human genome

      MOLECULAR BIOLOGY AND EVOLUTION
    29. Duret, L; Hurst, LD
      The elevated GC content at exonic third sites is not evidence against neutralist models of isochore evolution

      MOLECULAR BIOLOGY AND EVOLUTION
    30. Wang, HC; Badger, J; Kearney, P; Li, M
      Analysis of codon usage patterns of bacterial genomes using the self-organizing map

      MOLECULAR BIOLOGY AND EVOLUTION
    31. Parsch, J; Meiklejohn, CD; Hauschteck-Jungen, E; Hunziker, P; Hartl, DL
      Molecular evolution of the ocnus and janus genes in the Drosophila melanogaster species subgroup

      MOLECULAR BIOLOGY AND EVOLUTION
    32. Takano-Shimizu, T
      Local changes in GC/AT substitution biases and in crossover frequencies onDrosophila chromosomes

      MOLECULAR BIOLOGY AND EVOLUTION
    33. Smith, NGC; Eyre-Walker, A
      Nucleotide substitution rate estimation in enterobacteria: Approximate andmaximum-likelihood methods lead to similar conclusions

      MOLECULAR BIOLOGY AND EVOLUTION
    34. Stewart, CN
      The utility of green fluorescent protein in transgenic plants

      PLANT CELL REPORTS
    35. Kanaya, S; Kinouchi, M; Abe, T; Kudo, Y; Yamada, Y; Nishi, T; Mori, H; Ikemura, T
      Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome

      GENE
    36. Ohno, H; Sakai, H; Washio, T; Tomita, M
      Preferential usage of some minor codons in bacteria

      GENE
    37. Vinogradov, AE
      Within-intron correlation with base composition of adjacent exons in different genomes

      GENE
    38. Holmberg, N; Farres, J; Bailey, JE; Kallio, PT
      Targeted expression of a synthetic codon optimized gene, encoding the spruce budworm antifreeze protein, leads to accumulation of antifreeze activityin the apoplasts of transgenic tobacco

      GENE
    39. Gupta, SK; Ghosh, TC
      Gene expressivity is the main factor in dictating the codon usage variation among the genes in Pseudomonas aeruginosa

      GENE
    40. Vlachou, D; Komitopoulou, K
      The chorion genes of the medfly. II. DNA sequence evolution of the autosomal chorion genes s18, s15, s19 and s16 in Diptera

      GENE
    41. Wu, G; Henze, K; Muller, M
      Evolutionary relationships of the glucokinase from the amitochondriate protist, Trichomonas vaginalis

      GENE
    42. Stenstrom, CM; Jin, HN; Major, LL; Tate, WP; Isaksson, LA
      Codon bias at the 3 '-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli

      GENE
    43. Haring, D; Kypr, J
      Mosaic structure of the DNA molecules of the human chromosomes 21 and 22

      MOLECULAR BIOLOGY REPORTS
    44. Spergel, DJ; Kruth, U; Shimshek, DR; Sprengel, R; Seeburg, PH
      Using reporter genes to label selected neuronal populations in transgenic mice for gene promoter, anatomical, and physiological studies

      PROGRESS IN NEUROBIOLOGY
    45. Garapin, AC; Ma, L; Pescher, P; Lagranderie, M; Marchal, G
      Mixed immune response induced in rodents by two naked DNA genes coding formycobacterial glycosylated proteins

      VACCINE
    46. Traub, PC; Schmidt-Dannert, C; Schmitt, J; Schmid, RD
      Gene synthesis, expression in E-coli, and in vitro refolding of Pseudomonas sp KWI 56 and Chromobacterium viscosum lipases and their chaperones

      APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
    47. Percudani, R
      Restricted wobble rules for eukaryotic genomes

      TRENDS IN GENETICS
    48. Kondrashov, AS
      Sex and U

      TRENDS IN GENETICS
    49. Cinquin, O; Christopherson, RI; Menz, RI
      A hybrid plasmid for expression of toxic malarial proteins in Escherichia coli

      MOLECULAR AND BIOCHEMICAL PARASITOLOGY
    50. Fernandez, V; Zavala, A; Musto, H
      Evidence for translational selection in codon usage in Echinococcus spp.

      PARASITOLOGY
    51. Leder, C; Kleinschmidt, JA; Wiethe, C; Muller, M
      Enhancement of capsid gene expression: Preparing the human papillomavirus type 16 major structural gene L1 for DNA vaccination purposes

      JOURNAL OF VIROLOGY
    52. Kliman, RM; Rogers, BT; Noor, MAF
      Differences in (G + C) content between species: a commentary on Forsdyke's"chromosomal viewpoint" of speciation

      JOURNAL OF THEORETICAL BIOLOGY
    53. Cristillo, AD; Mortimer, JR; Barrette, IH; Lillicrap, TP; Forsdyke, DR
      Double-stranded RNA as a not-self alarm signal: to evade, most viruses purine-load their RNAs, but some (HTLV-1, Epstein-Barr) pyrimidine-load

      JOURNAL OF THEORETICAL BIOLOGY
    54. Mackiewicz, P; Mackiewicz, D; Gierlik, A; Kowalczuk, M; Nowicka, A; Dudkiewicz, M; Dudek, MR; Cebrat, S
      The differential killing of genes by inversions in prokaryotic genomes

      JOURNAL OF MOLECULAR EVOLUTION
    55. Ardell, DH; Sella, G
      On the evolution of redundancy in genetic codes

      JOURNAL OF MOLECULAR EVOLUTION
    56. Kanaya, S; Yamada, Y; Kinouchi, M; Kudo, Y; Ikemura, T
      Codon usage and tRNA genes in eukaryotes: Correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessedby multivariate analysis

      JOURNAL OF MOLECULAR EVOLUTION
    57. Tsunoyama, K; Bellgard, MI; Gojobori, T
      Intragenic variation of synonymous substitution rates is caused by nonrandom mutations at methylated CpG

      JOURNAL OF MOLECULAR EVOLUTION
    58. Bellgard, M; Schibeci, D; Trifonov, E; Gojobori, T
      Early detection of G+C differences in bacterial species inferred from the comparative analysis of the two completely sequenced Helicobacter pylori strains

      JOURNAL OF MOLECULAR EVOLUTION
    59. Wang, B
      Limitations of compositional approach to identifying horizontally transferred genes

      JOURNAL OF MOLECULAR EVOLUTION
    60. Szczepanik, D; Mackiewicz, P; Kowalczuk, M; Gierlik, A; Nowicka, A; Dudek, MR; Cebrat, S
      Evolution rates of genes on leading and lagging DNA strands

      JOURNAL OF MOLECULAR EVOLUTION
    61. Jenkins, GM; Pagel, M; Gould, EA; Zanotto, PMD; Holmes, EC
      Evolution of base composition and codon usage bias in the genus Flavivirus

      JOURNAL OF MOLECULAR EVOLUTION
    62. Marais, G; Duret, L
      Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegans

      JOURNAL OF MOLECULAR EVOLUTION
    63. Zhang, LQ; Pond, SK; Gaut, BS
      A survey of the molecular evolutionary dynamics of twenty-five multigene families from four grass taxa

      JOURNAL OF MOLECULAR EVOLUTION
    64. Vieira, CP; Charlesworth, D
      Low diversity and divergence in the fill gene family of Antirrhinum (Scrophulariaceae)

      JOURNAL OF MOLECULAR EVOLUTION
    65. Vinogradov, AE
      Intron length and codon usage

      JOURNAL OF MOLECULAR EVOLUTION
    66. Sorensen, MA
      Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-)strains during amino acid starvation: A simple model for the effect of ppGpp on translational accuracy

      JOURNAL OF MOLECULAR BIOLOGY
    67. Miyagawa, S; Yamada, M; Matsunami, K; Koresawa, Y; Ikawa, M; Okabe, M; Shirakura, R
      A synthetic DAF (CD55) gene based on optimal codon usage for transgenic animals

      JOURNAL OF BIOCHEMISTRY
    68. Massey, HC; Ball, CC; Lok, JB
      PCR amplification of putative gpa-2 and gpa-3 orthologs from the (A+T)-rich genome of Strongyloides stercoralis

      INTERNATIONAL JOURNAL FOR PARASITOLOGY
    69. Grocock, RJ; Sharp, PM
      Synonymous codon usage in Cryptosporidium parvum: identification of two distinct trends among genes

      INTERNATIONAL JOURNAL FOR PARASITOLOGY
    70. Jensen, MA; True, HL; Chernoff, YO; Lindquist, S
      Molecular population genetics and evolution of a prion-like protein in Saccharomyces cerevisiae

      GENETICS
    71. Schmid, KJ; Aquadro, CF
      The evolutionary analysis of "orphans" from the Drosophila genome identifies rapidly diverging and incorrectly annotated genes

      GENETICS
    72. McVean, GAT; Vieira, J
      Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in drosophila

      GENETICS
    73. Dunn, KA; Bielawski, JP; Yang, ZH
      Substitution rates in Drosophila nuclear genes: Implications for translational selection

      GENETICS
    74. Naya, H; Romero, H; Carels, N; Zavala, A; Musto, H
      Translational selection shapes codon usage in the GC-rich genome of Chlamydomonas reinhardtii

      FEBS LETTERS
    75. Wang, J; Zhang, CT
      Identification of protein-coding genes in the genome of Vibrio cholerae with more than 98% accuracy using occurrence frequencies of single nucleotides

      EUROPEAN JOURNAL OF BIOCHEMISTRY
    76. Yelin, R; Schuldiner, S
      Vesicular monoamine transporters heterologously expressed in the yeast Saccharomyces cerevisiae display high-affinity tetrabenazine binding

      BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
    77. Wu, L; Barry, MA
      Fusion protein vectors to increase protein production and evaluate the immunogenicity of genetic vaccines

      MOLECULAR THERAPY
    78. McEwan, NR; Eschenlauer, SCP; Calza, RE; Wallace, RJ; Newbold, CJ
      The 3 ' untranslated region of messages in the rumen protozoan Entodinium caudatum

      PROTIST
    79. Lafay, B; Atherton, JC; Sharp, PM
      Absence of translationally selected synonymous codon usage bias in Helicobacter pylori

      MICROBIOLOGY-UK
    80. Grynberg, M; Topczewski, J; Godzik, A; Paszewski, A
      The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases

      MICROBIOLOGY-UK
    81. Nikaido, I; Asamizu, E; Nakajima, M; Nakamura, Y; Saga, N; Tabata, S
      Generation of 10,154 expressed sequence tags from a leafy gametophyte of amarine red alga, Porphyra yezoensis

      DNA RESEARCH
    82. Garcia-Vallve, S; Romeu, A; Palau, J
      Horizontal gene transfer in bacterial and archaeal complete genomes

      GENOME RESEARCH
    83. Davuluri, RV; Suzuki, Y; Sugano, S; Zhang, MQ
      CART classification of human 5 ' UTR sequences

      GENOME RESEARCH
    84. Dubensky, TW; Liu, MA; Ulmer, JB
      Delivery systems for gene-based vaccines

      MOLECULAR MEDICINE
    85. Rodolphe, F; Mathe, C
      Translation conditional models for protein coding sequences

      JOURNAL OF COMPUTATIONAL BIOLOGY
    86. Dimopoulos, M; Bagnara, AS; Edwards, MR
      Characterisation and sequence analysis of a carbamate kinase gene from thediplomonad Hexamita inflata

      JOURNAL OF EUKARYOTIC MICROBIOLOGY
    87. Grosse, I; Herzel, H; Buldyrev, SV; Stanley, HE
      Species independence of mutual information in coding and noncoding DNA

      PHYSICAL REVIEW E
    88. Xia, XH
      Phylogenetic relationship among horseshoe crab species: Effect of substitution models on phylogenetic analyses

      SYSTEMATIC BIOLOGY
    89. Matsuo, Y
      Molecular evolution of the histone 3 multigene family in the Drosophila melanogaster species subgroup

      MOLECULAR PHYLOGENETICS AND EVOLUTION
    90. Humphreys, DP; Sehdev, M; Chapman, AP; Ganesh, R; Smith, BJ; King, LM; Glover, DJ; Reeks, DG; Stephens, PE
      High-level periplasmic expression in Escherichia coli using a eukaryotic signal peptide: Importance of codon usage at the 5 ' end of the coding sequence

      PROTEIN EXPRESSION AND PURIFICATION
    91. Tang, GL; Wang, YF; Bao, JS; Chen, HB
      Overexpression in Escherichia coli and characterization of the chloroplastfructose-1,6-bisphosphatase from wheat

      PROTEIN EXPRESSION AND PURIFICATION
    92. Charlesworth, B; Charlesworth, D
      The degeneration of Y chromosomes

      PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES
    93. Morschhauser, J; Kohler, G; Ziebuhr, W; Blum-Oehler, G; Dobrindt, U; Hacker, J
      Evolution of microbial pathogens

      PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES
    94. Danchin, A; Guerdoux-Jamet, P; Moszer, I; Nitschke, P
      Mapping the bacterial cell architecture into the chromosome

      PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES
    95. Gautier, C
      Compositional bias in DNA

      CURRENT OPINION IN GENETICS & DEVELOPMENT
    96. Anderson, PE; Gober, JW
      FlbT, the post-transcriptional regulator of flagellin synthesis in Caulobacter crescentus, interacts with the 5 ' untranslated region of flagellin mRNA

      MOLECULAR MICROBIOLOGY
    97. You, YJ; He, YK; Borrows, PE; Forrest, SR; Petasis, NA; Thompson, ME
      Fluorophores related to the green fluorescent protein and their use in optoelectronic devices

      ADVANCED MATERIALS
    98. Mori, H; Isono, K; Horiuchi, T; Miki, T
      Functional genomics of Escherichia coli in Japan

      RESEARCH IN MICROBIOLOGY
    99. Dufour, C; Casane, D; Denton, D; Wickings, J; Corvol, P; Jeunemaitre, X
      Human-chimpanzee DNA sequence variation in the four major genes of the renin angiotensin system

      GENOMICS
    100. Pavesi, A; Ficarelli, A; Tassi, F; Restivo, FM
      Cloning of two glutamate dehydrogenase cDNAs from Asparagus officinalis: Sequence analysis and evolutionary implications

      GENOME


ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 27/05/20 alle ore 09:33:39