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La ricerca find articoli where soggetti phrase all words 'TERTIARY STRUCTURE' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 673 riferimenti
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    1. Ettrich, R; Melichercik, M; Teisinger, J; Ettrichova, O; Krumscheid, R; Hofbauerova, K; Kvasnicka, P; Schoner, W; Amler, E
      Three-dimensional structure of the large cytoplasmic H-4-H-5 loop of Na+/K+-ATPase deduced by restraint-based comparative modeling shows only one ATPbinding site

      JOURNAL OF MOLECULAR MODELING
    2. Hoshino, M; Sonoki, H; Suzuki, H; Adachi, H; Miyazaki, Y; Yamanaka, K
      Laser photolysis studies of oxy- and carbonylhemoglobin in red blood cells. Effects of cell membrane on reversible binding of O-2 and CO

      JOURNAL OF PHYSICAL CHEMISTRY B
    3. Lilley, DMJ
      Origins of RNA catalysis in the hairpin ribozyme

      CHEMBIOCHEM
    4. Gilis, D; Rooman, M
      Ab initio structure predictions using a hierarchical approach applied to 434 cro and the Drosophila homeodomain

      THEORETICAL CHEMISTRY ACCOUNTS
    5. Holbrook, SR; Holbrook, EL; Walukiewicz, HE
      Crystallization of RNA

      CELLULAR AND MOLECULAR LIFE SCIENCES
    6. Deane, CM; Kaas, Q; Blundell, TL
      SCORE: predicting the core of protein models

      BIOINFORMATICS
    7. Afonnikov, DA; Oshchepkov, DY; Kolchanov, NA
      Detection of conserved physico-chemical characteristics of proteins by analyzing clusters of positions with co-ordinated substitutions

      BIOINFORMATICS
    8. Fay, MJ; Walter, NG; Burke, JM
      Imaging of single hairpin ribozymes in solution by atomic force microscopy

      RNA-A PUBLICATION OF THE RNA SOCIETY
    9. Dertinger, D; Uhlenbeck, OC
      Evaluation of methylphosphonates as analogs for detecting phosphate contacts in RNA-protein complexes

      RNA-A PUBLICATION OF THE RNA SOCIETY
    10. Silverman, SK; Cech, TR
      An early transition state for folding of the P4-P6 RNA domain

      RNA-A PUBLICATION OF THE RNA SOCIETY
    11. Ryder, SP; Oyelere, AK; Padilla, JL; Klostermeier, D; Millar, DP; Strobel, SA
      Investigation of adenosine base ionization in the hairpin ribozyme by nucleotide analog interference mapping

      RNA-A PUBLICATION OF THE RNA SOCIETY
    12. Stage-Zimmermann, TK; Uhlenbeck, OC
      A covalent crosslink converts the hammerhead ribozyme from a ribonuclease to an RNA ligase

      NATURE STRUCTURAL BIOLOGY
    13. Bonneau, R; Baker, D
      Ab initio protein structure prediction: Progress and prospects

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    14. Doherty, EA; Doudna, JA
      Ribozyme structures and mechanisms

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    15. Rost, B
      Review: Protein secondary structure prediction continues to rise

      JOURNAL OF STRUCTURAL BIOLOGY
    16. Walter, NG
      Structural dynamics of catalytic RNA highlighted by fluorescence resonanceenergy transfer

      METHODS
    17. Hampel, KJ; Burke, JM
      Time-resolved hydroxyl-radical footprinting of RNA using Fe(II)-EDTA

      METHODS
    18. Klostermeier, D; Millar, DP
      RNA conformation and folding studied with fluorescence resonance energy transfer

      METHODS
    19. Basu, S; Strobel, SA
      Biochemical detection of monovalent metal ion binding sites within RNA

      METHODS
    20. Smith, AM; Benjamin, DC; Derewenda, U; Smith, WA; Thomas, WR; Chapman, MD
      Sequence polymorphisms and antibody binding to the group 2 dust mite allergens

      INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY
    21. Juneau, K; Podell, E; Harrington, DJ; Cech, TR
      Structural basis of the enhanced stability of a mutant ribozyme domain anda detailed view of RNA-solvent interactions

      STRUCTURE
    22. Zhang, JT
      The multi-structural feature of the multidrug resistance gene product P-glycoprotein: implications for its mechanism of action (Hypothesis)

      MOLECULAR MEMBRANE BIOLOGY
    23. Ni, XH; Schachman, HK
      In vivo assembly of aspartate transcarbamoylase from fragmented and circularly permuted catalytic polypeptide chains

      PROTEIN SCIENCE
    24. Smith, VF; Matthews, CR
      Testing the role of chain connectivity on the stability and structure of dihydrofolate reductase from E-coli: Fragment complementation and circular permutation reveal stable, alternatively folded forms

      PROTEIN SCIENCE
    25. Wang, YX; Cui, GY; Shen, J; Huang, AJ; Liu, XY; Chen, YZ; Jiang, CL
      Analgesic domains of interferon-alpha

      NEUROREPORT
    26. Butcher, SE
      Structure and function of the small ribozymes

      CURRENT OPINION IN STRUCTURAL BIOLOGY
    27. Baltzer, L; Nilsson, J
      Emerging principles of de novo catalyst design

      CURRENT OPINION IN BIOTECHNOLOGY
    28. Domokos, G; Healey, T
      Hidden symmetry of global solutions in twisted elastic rings

      JOURNAL OF NONLINEAR SCIENCE
    29. Niimi, T; Osawa, M; Yamaji, N; Yasunaga, K; Sakashita, H; Mase, T; Tanaka, A; Fujita, S
      Letter to the Editor: NMR structure of human fibronectin EDA

      JOURNAL OF BIOMOLECULAR NMR
    30. van Veen, HW; Higgins, CF; Konings, WN
      Multidrug transport by ATP binding cassette transporters: a proposed two-cylinder engine mechanism

      RESEARCH IN MICROBIOLOGY
    31. Takai, T; Hatanaka, H; Ichikawa, S; Yokota, T; Inagaki, F; Okumura, Y
      Effects of double mutation at two distant IgE-binding sites in the three-dimensional structure of the major house dust mite allergen Der f 2 on IgE-binding and histamine-releasing activity

      BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
    32. Gilis, D; Rooman, M
      Identification and ab initio simulations of early folding unit in proteins

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    33. Yamashita, R; Matsubara, K; Kato, K
      A comprehensive collection of mouse zinc finger motifs compiled by molecular indexing

      GENE
    34. Scott, JE
      Structure and function in extracellular matrices depend on interactions between anionic glycosaminoglycans

      PATHOLOGIE BIOLOGIE
    35. Swisher, J; Duarte, DM; Su, LJ; Pyle, AM
      Visualizing the solvent-inaccessible core of a group II intron ribozyme

      EMBO JOURNAL
    36. Lafontaine, DA; Norman, DG; Lilley, DMJ
      Structure, folding and activity of the VS ribozyme: importance of the 2-3-6 helical junction

      EMBO JOURNAL
    37. Pinard, R; Hampel, KJ; Heckman, JE; Lambert, D; Chan, PA; Major, F; Burke, JM
      Functional involvement of G8 in the hairpin ribozyme cleavage mechanism

      EMBO JOURNAL
    38. Atsumi, S; Ikawa, Y; Shiraishi, H; Inoue, T
      Design and development of a catalytic ribonucleoprotein

      EMBO JOURNAL
    39. Hiley, SL; Collins, RA
      Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme

      EMBO JOURNAL
    40. Terasawa, H; Noda, Y; Ito, T; Hatanaka, H; Ichikawa, S; Ogura, K; Sumimoto, H; Inagaki, F
      Structure and ligand recognition of the PB1 domain: a novel protein modulebinding to the PC motif

      EMBO JOURNAL
    41. Bjork, GR; Jacobsson, K; Nilsson, K; Johansson, MJO; Bystrom, AS; Persson, OP
      A primordial tRNA modification required for the evolution of life?

      EMBO JOURNAL
    42. Coutte, L; Slomianny, MC; Malecha, J; Baert, JL
      Cloning and expression analysis of a cDNA that encodes a leech hemerythrin

      BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION
    43. Chasse, GA; Rodriguez, AM; Mak, ML; Deretey, E; Perczel, A; Sosa, CP; Enriz, RD; Csizmadia, IG
      Peptide and protein folding

      JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM
    44. Gromiha, MM; Selvaraj, S
      Role of medium- and long-range interactions in discriminating globular andmembrane proteins

      INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
    45. Jyothi, S; Joshi, RR
      Protein structure determination by non-parametric regression and knowledge-based constraints

      COMPUTERS & CHEMISTRY
    46. Zenkova, M; Beloglazova, N; Sil'nikov, V; Vlassov, V; Giege, R
      RNA cleavage by 1,4-diazabicyclo[2.2.2]octane-imidazole conjugates

      RIBONUCLEASES, PT A
    47. Hampel, KJ; Pinard, R; Burke, JM
      Catalytic and structural assays for the hairpin ribozyme

      RIBONUCLEASES, PT A
    48. Schon, JC; Jansen, M
      Determination, prediction, and understanding of structures, using the energy landscapes of chemical systems - Part III

      ZEITSCHRIFT FUR KRISTALLOGRAPHIE
    49. Fann, JY; Kovarik, A; Hemleben, V; Tsirekidze, NI; Beridze, TG
      Molecular and structural evolution of Citrus satellite DNA

      THEORETICAL AND APPLIED GENETICS
    50. Taylor, WR; May, ACW; Brown, NP; Aszodi, A
      Protein structure: geometry, topology and classification

      REPORTS ON PROGRESS IN PHYSICS
    51. Rupert, PB; Ferre-D'Amare, AR
      Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis

      NATURE
    52. Hwa, J; Klein-Seetharaman, J; Khorana, HG
      Structure and function in rhodopsin: Mass spectrometric identification of the abnormal intradiscal disulfide bond in misfolded retinitis pigmentosa mutants

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    53. Chang, I; Cieplak, M; Dima, RI; Maritan, A; Banavar, JR
      Protein threading by learning

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    54. Misra, VK; Draper, DE
      A thermodynamic framework for Mg2+ binding to RNA

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    55. Sood, VD; Collins, RA
      Functional equivalence of the uridine turn and the hairpin as building blocks of tertiary structure in the Neurospora VS ribozyme

      JOURNAL OF MOLECULAR BIOLOGY
    56. Amodeo, P; Fraternali, F; Lesk, AM; Pastore, A
      Modularity and homology: Modelling of the titin type I modules and their interfaces

      JOURNAL OF MOLECULAR BIOLOGY
    57. Taylor, WR
      Defining linear segments in protein structure

      JOURNAL OF MOLECULAR BIOLOGY
    58. Elgavish, T; Cannone, JJ; Lee, JC; Harvey, SC; Gutell, RR
      AA.AG@Helix.Ends: A : A and A : G base-pairs at the ends of 16 S and 23 S rRNA helices

      JOURNAL OF MOLECULAR BIOLOGY
    59. Webb, AE; Rose, MA; Westhof, E; Weeks, KM
      Protein-dependent transition states for ribonucleoprotein assembly

      JOURNAL OF MOLECULAR BIOLOGY
    60. Yadava, RS; Choi, AJ; Lebruska, LL; Fedor, MJ
      Hairpin ribozymes with four-way helical junctions mediate intracellular RNA ligation

      JOURNAL OF MOLECULAR BIOLOGY
    61. Russell, R; Herschlag, D
      Probing the folding landscape of the Tetrahymena ribozyme: Commitment to form the native conformation is late in the folding pathway

      JOURNAL OF MOLECULAR BIOLOGY
    62. Geese, WJ; Waring, RB
      A comprehensive characterization of a group IB intron and its encoded maturase reveals that protein-assisted splicing requires an almost intact intron RNA

      JOURNAL OF MOLECULAR BIOLOGY
    63. Caprara, MG; Myers, CA; Lambowitz, AM
      Interaction of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase(CYT-18 protein) with the group I intron P4-P6 domain. Thermodynamic analysis and the role of metal ions

      JOURNAL OF MOLECULAR BIOLOGY
    64. Pinard, R; Lambert, D; Heckman, JE; Esteban, JA; Gundlach, CW; Hampel, KJ; Glick, GD; Walter, NG; Major, F; Burke, JM
      The hairpin ribozyme substrate binding-domain: A highly constrained D-shaped conformation

      JOURNAL OF MOLECULAR BIOLOGY
    65. Su, LHJ; Qin, PZ; Michels, WJ; Pyle, AM
      Guiding ribozyme cleavage through motif recognition: The mechanism of cleavage site selection by a group II intron ribozyme

      JOURNAL OF MOLECULAR BIOLOGY
    66. Mandel-Gutfreund, Y; Zaremba, SM; Gregoret, LM
      Contributions of residue pairing to beta-sheet formation: Conservation andcovariation of amino acid residue pairs on antiparallel beta-strands

      JOURNAL OF MOLECULAR BIOLOGY
    67. Treiber, DK; Williamson, JR
      Concerted kinetic folding of a multidomain ribozyme with a disrupted loop-receptor interaction

      JOURNAL OF MOLECULAR BIOLOGY
    68. Roy, T
      A robust approach to protein foldability measures based on spin-glass models

      JOURNAL OF MATHEMATICAL PHYSICS
    69. Eastwood, MP; Wolynes, PG
      Role of explicitly cooperative interactions in protein folding funnels: A simulation study

      JOURNAL OF CHEMICAL PHYSICS
    70. Wilson, GM; Sutphen, K; Moutafis, M; Sinha, S; Brewer, G
      Structural remodeling of an A + U-rich RNA element by cation or AUF1 binding

      JOURNAL OF BIOLOGICAL CHEMISTRY
    71. de Pouplana, LR; Schimmel, P
      Operational RNA code for amino acids in relation to genetic code in evolution

      JOURNAL OF BIOLOGICAL CHEMISTRY
    72. Kojima, S; Yanai, H; Miura, K
      Accelerated refolding of subtilisin BPN ' by tertiary-structure-forming mutants of its propeptide

      JOURNAL OF BIOCHEMISTRY
    73. Ikawa, Y; Nohmi, K; Atsumi, S; Shiraishi, H; Inoue, T
      A comparative study on two GNRA-tetraloop receptors: 11-nt and IC3 motifs

      JOURNAL OF BIOCHEMISTRY
    74. Gorinstein, S; Caspi, A; Goshev, I; Moncheva, S; Zemser, M; Weisz, M; Libman, I; Lerner, HT; Trakhtenberg, S; Martin-Belloso, O
      Beer consumption and changes in stability of human serum proteins

      JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
    75. Eastwood, MP; Hardin, C; Luthey-Schulten, Z; Wolynes, PG
      Evaluating protein structure-prediction schemes using energy landscape theory

      IBM JOURNAL OF RESEARCH AND DEVELOPMENT
    76. Manciu, L; Chang, XB; Riordan, JR; Buyse, F; Ruysschaert, JM
      Nucleotide-induced conformational changes in the human multidrug resistance protein MRP1 are related to the capacity of chemotherapeutic drugs to accumulate or not in resistant cells

      FEBS LETTERS
    77. Sinibaldi, F; Fiorucci, L; Mei, G; Ferri, T; Desideri, A; Ascoli, F; Santucci, R
      Cytochrome c reconstituted from two peptide fragments displays native-likeredox properties

      EUROPEAN JOURNAL OF BIOCHEMISTRY
    78. Weers, PMM; Narayanaswami, V; Ryan, RO
      Modulation of the lipid binding properties of the N-terminal domain of human apolipoprotein E3

      EUROPEAN JOURNAL OF BIOCHEMISTRY
    79. Baumeister, B; Das, G; Sakai, N; Matile, S
      'Never mind a barrel'

      CHIMIA
    80. Walter, NG; Chan, PA; Hampel, KJ; Millar, DP; Burke, JM
      A base change in the catalytic core of the hairpin ribozyme perturbs function but not domain docking

      BIOCHEMISTRY
    81. Wilson, TJ; Zhao, ZY; Maxwell, K; Kontogiannis, L; Lilley, DMJ
      Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme

      BIOCHEMISTRY
    82. Flynn-Charlebois, A; Lee, N; Suga, H
      A single metal ion plays structural and chemical roles in an aminoacyl-transferase ribozyme

      BIOCHEMISTRY
    83. Lee, N; Suga, H
      Essential roles of innersphere metal ions for the formation of the glutamine binding site in a bifunctional ribozyme

      BIOCHEMISTRY
    84. Grimard, V; Vigano, C; Margolles, A; Wattiez, R; van Veen, HW; Konings, WN; Ruysschaert, JM; Goormaghtigh, E
      Structure and dynamics of the membrane-embedded domain of LmrA investigated by coupling polarized ATR-FTIR spectroscopy and H-1/H-2 exchange

      BIOCHEMISTRY
    85. Kakuta, Y; Horio, T; Takahashi, Y; Fukuyama, K
      Crystal structure of Escherichia coli Fdx, an adrenodoxin-type ferredoxin involved in the assembly of iron-sulfur clusters

      BIOCHEMISTRY
    86. Cai, J; Daoud, R; Georges, E; Gros, P
      Functional expression of multidrug resistance protein 1 in Pichia pastoris

      BIOCHEMISTRY
    87. Khan, I; Dantsker, D; Samuni, U; Friedman, AJ; Bonaventura, C; Manjula, B; Acharya, SA; Friedman, JM
      beta 93 modified hemoglobin: Kinetic and conformational consequences

      BIOCHEMISTRY
    88. Vaidya, A; Suga, H
      Diverse roles of metal ions in acyl-transferase ribozymes

      BIOCHEMISTRY
    89. Shelton, VM; Sosnick, TR; Pan, T
      Altering the intermediate in the equilibrium folding of unmodified yeast tRNA(Phe) with monovalent and divalent cations

      BIOCHEMISTRY
    90. Hampel, KJ; Burke, JM
      A conformational change in the "loop E-like" motif of the hairpin ribozymeis coincidental with domain docking and is essential for catalysis

      BIOCHEMISTRY
    91. Saba, RI; Goormaghtigh, E; Ruysschaert, JM; Herchuelz, A
      Conformational changes of the 120-kDa Na+/Ca2+ exchanger protein upon ligand binding: A Fourier transform infrared spectroscopy study

      BIOCHEMISTRY
    92. Helm, M; Kopka, ML; Sharma, SK; Lown, JW; Giege, R
      RNase activity of a DNA minor groove binder with a minimalist catalytic motif from RNase A

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    93. Arreguin-Espinosa, R; Fenton, B; Vazquez-Contreras, E; Arreguin, B; Garcia-Hernandez, E
      PFA, a novel mollusk agglutinin, is structurally related to the ribosome-inactivating protein superfamily

      ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
    94. Tamoi, M; Kanaboshi, H; Miyasaka, H; Shigeoka, S
      Molecular mechanisms of the resistance to hydrogen peroxide of enzymes involved in the Calvin cycle from halotolerant Chlamydomonas sp W80

      ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
    95. Lakowicz, JR; Piszczek, G; Kang, JS
      On the possibility of long-wavelength long-lifetime high-quantum-yield luminophores

      ANALYTICAL BIOCHEMISTRY
    96. Edwards, TE; Okonogi, TM; Robinson, BH; Sigurdsson, ST
      Site-specific incorporation of nitroxide spin-labels into internal sites of the TAR RNA; structure-dependent dynamics of RNA by EPR spectroscopy

      JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
    97. Sumathi, S; Dasgupta, D
      Reactivity of 3-HBA-6-hydroxylase with diethylpyrocarbonate and N-bromosuccinimide: Effect of chemical modifications on kinetic and spectral properties of the enzyme

      BIOTECHNOLOGY PROGRESS
    98. Woodson, SA
      Recent insights on RNA folding mechanisms from catalytic RNA

      CELLULAR AND MOLECULAR LIFE SCIENCES
    99. Poelarends, GJ; Mazurkiewicz, P; Putman, M; Cool, RH; van Veen, HW; Konings, WN
      An ABC-type multidrug transporter of Lactococcus lactis possesses an exceptionally broad substrate specificity

      DRUG RESISTANCE UPDATES
    100. Mouat, MF
      Dihydrofolate influences the activity of Escherichia coli dihydrofolate reductase synthesised de novo

      INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY


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Documento generato il 22/02/20 alle ore 11:53:51