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La ricerca find articoli where soggetti phrase all words 'SEQUENCE DATABASES' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 208 riferimenti
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    1. Ericsson, D; Ekstrom, S; Nilsson, J; Bergquist, J; Marko-Varga, G; Laurell, T
      Downsizing proteolytic digestion and analysis using dispenser-aided samplehandling and nanovial matrix-assisted laser/desorption ionization-target arrays

      PROTEOMICS
    2. Li, JJ; Tremblay, TL; Wang, C; Attiya, S; Harrison, DJ; Thibault, P
      Integrated system for high-throughput protein identification using a microfabricated device coupled to capillary electrophoresis/nanoelectrospray mass spectrometry

      PROTEOMICS
    3. Choudhary, JS; Blackstock, WP; Creasy, DM; Cottrell, JS
      Interrogating the human genome using uninterpreted mass spectrometry data

      PROTEOMICS
    4. Mattow, J; Jungblut, PR; Muller, EC; Kaufmann, SHE
      Identification of acidic, low molecular mass proteins of Mycobacterium tuberculosis strain H37Rv by matrix-assisted laser desorption/ionization and electrospray ionization mass spectrometry

      PROTEOMICS
    5. Stensballe, A; Andersen, S; Jensen, ON
      Characterization of phosphoproteins from electrophoretic gels by nanoscaleFe(III) affinity chromatography with off-line mass spectrometry analysis

      PROTEOMICS
    6. Larsen, MR; Sorensen, GL; Fey, SJ; Larsen, PM; Roepstorff, P
      Phospho-proteomics: Evaluation of the use of enzymatic de-phosphorylation and differential mass spectrometric peptide mass mapping for site specific phosphorylation assignment in proteins separated by gel electrophoresis

      PROTEOMICS
    7. Kuster, B; Krogh, TN; Mortz, E; Harvey, DJ
      Glycosylation analysis of gel-separated proteins

      PROTEOMICS
    8. Seow, TK; Liang, RCMY; Leow, CK; Chung, MCM
      Hepatocellular carcinoma: From bedside to proteomics

      PROTEOMICS
    9. Li, JJ; Tremblay, TL; Thibault, P; Wang, C; Attiya, S; Harrison, DJ
      Integrated system for high-throughput protein identification using a microfabricated device coupled to capillary electrophoresis/nanoelectrospray mass spectrometry

      EUROPEAN JOURNAL OF MASS SPECTROMETRY
    10. Wick, LM; Quadroni, M; Egli, T
      Short- and long-term changes in proteome composition and kinetic properties in a culture of Escherichia coli during transition from glucose-excess toglucose-limited growth conditions in continuous culture and vice versa

      ENVIRONMENTAL MICROBIOLOGY
    11. Jonsson, AP
      Mass spectrometry for protein and peptide characterisation

      CELLULAR AND MOLECULAR LIFE SCIENCES
    12. Nyman, TA
      The role of mass spectrometry in proteome studies

      BIOMOLECULAR ENGINEERING
    13. Lamer, S; Jungblut, PR
      Matrix-assisted laser desorption-ionization mass spectrometry peptide massfingerprinting for proteome analysis: identification efficiency after on-blot or in-gel digestion with and without desalting procedures

      JOURNAL OF CHROMATOGRAPHY B
    14. Coghlan, A; Mac Donaill, DA; Buttimore, NH
      Representation of amino acids as five-bit or three-bit patterns for filtering protein databases

      BIOINFORMATICS
    15. Bjarnadottir, M; Nilsson, C; Lindstrom, V; Westman, A; Davidsson, P; Thormodsson, F; Blondal, H; Gudmundsson, G; Grubb, A
      The cerebral hemorrhage-producing cystatin C variant (L68Q) in extracellular fluids

      AMYLOID-JOURNAL OF PROTEIN FOLDING DISORDERS
    16. Pizzi, E; Frontali, C
      Low-complexity regions in Plasmodium falciparum proteins

      GENOME RESEARCH
    17. Meng, FY; Cargile, BJ; Miller, LM; Forbes, AJ; Johnson, JR; Kelleher, NL
      Informatics and multiplexing of intact protein identification in bacteria and the archaea

      NATURE BIOTECHNOLOGY
    18. Kobayashi, R
      A proteomics approach to find a new breast cancer-specific antigenic marker - Commentary

      CLINICAL CANCER RESEARCH
    19. Peng, JM; Gygi, SP
      Proteomics: the move to mixtures

      JOURNAL OF MASS SPECTROMETRY
    20. Owens, RM; Grant, A; Davies, N; O'Connor, CD
      Copurification of the lac repressor with polyhistidine-tagged proteins in immobilized metal affinity chromatography

      PROTEIN EXPRESSION AND PURIFICATION
    21. Medzihradszky, KF; Leffler, H; Baldwin, MA; Burlingame, AL
      Protein identification by in-gel digestion, high-performance liquid chromatography, and mass spectrometry: Peptide analysis by complementary ionization techniques

      JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
    22. Mecca, G; Bonner, AJ
      Query languages for sequence databases: Termination and complexity

      IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING
    23. Peri, S; Steen, H; Pandey, A
      GPMAW - a software tool for analyzing proteins and peptides

      TRENDS IN BIOCHEMICAL SCIENCES
    24. Kim, JS; Kim, HJ
      Matrix-assisted laser desorption/ionization time-of-flight mass spectrometric observation of a peptide triplet induced by thermal cleavage of cystine

      RAPID COMMUNICATIONS IN MASS SPECTROMETRY
    25. Papac, DI; Shahrokh, Z
      Mass spectrometry innovations in drug discovery and development

      PHARMACEUTICAL RESEARCH
    26. Moller, A; Soldan, M; Volker, U; Maser, E
      Two-dimensional gel electrophoresis: a powerful method to elucidate cellular responses to toxic compounds

      TOXICOLOGY
    27. Griffiths, WJ; Jonsson, AP; Liu, SY; Rai, DK; Wang, YQ
      Electrospray and tandem mass spectrometry in biochemistry

      BIOCHEMICAL JOURNAL
    28. Burstin, J; Deniot, G; Potier, J; Weinachter, C; Aubert, G; Baranger, A
      Microsatellite polymorphism in Pisum sativum

      PLANT BREEDING
    29. Fountoulakis, M; Takacs, B
      Effect of strong detergents and chaotropes on the detection of proteins intwo-dimensional gels

      ELECTROPHORESIS
    30. Smith, RD; Pasa-Tolic, L; Lipton, MS; Jensen, PK; Anderson, GA; Shen, YF; Conrads, TP; Udseth, HR; Harkewicz, R; Belov, ME; Masselon, C; Veenstra, TD
      Rapid quantitative measurements of proteomes by Fourier transform ion cyclotron resonance mass spectrometry

      ELECTROPHORESIS
    31. Brancia, FL; Butt, A; Beynon, RJ; Hubbard, SJ; Gaskell, SJ; Oliver, SG
      A combination of chemical derivatisation and improved bioinformatic tools optimises protein identification for proteomics

      ELECTROPHORESIS
    32. Ekstrom, S; Nilsson, J; Helldin, G; Laurell, T; Marko-Varga, G
      Disposable polymeric high-density nanovial arrays for matrix assisted laser desorption/ionization-time of flight-mass spectrometry: II. Biological applications

      ELECTROPHORESIS
    33. Nordhoff, E; Egelhofer, V; Giavalisco, P; Eickhoff, H; Horn, M; Przewieslik, T; Theiss, D; Schneider, U; Lehrach, H; Gobom, J
      Large-gel two-dimensional electrophoresis-matrix assisted laser desorption/ionization-time of flight-mass spectrometry: An analytical challenge for studying complex protein mixtures

      ELECTROPHORESIS
    34. Mattow, J; Jungblut, PR; Schaible, UE; Mollenkopf, HJ; Lamer, S; Zimny-Arndt, U; Hagens, K; Muller, EC; Kaufmann, SHE
      Identification of proteins from Mycobacterium tuberculosis missing in attenuated Mycobacterium bovis BCG strains

      ELECTROPHORESIS
    35. Park, SH; Chu, WW
      Discovering and matching elastic rules from sequence databases

      FUNDAMENTA INFORMATICAE
    36. Choudhary, JS; Blackstock, WP; Creasy, DM; Cottrell, JS
      Matching peptide mass spectra to EST and genomic DNA databases

      TRENDS IN BIOTECHNOLOGY
    37. Husi, H; Grant, SGN
      Proteomics of the nervous system

      TRENDS IN NEUROSCIENCES
    38. Attwood, TK; Miller, CJ
      Which craft is best in bioinformatics?

      COMPUTERS & CHEMISTRY
    39. Haebel, S; Kehr, J
      Matrix-assisted laser desorption/ionization time of flight mass spectrometry peptide mass fingerprints and post source decay: a tool for the identification and analysis of phloem proteins from Cacurbita maxima Duch. separated by two-dimensional polyacrylamide gel electrophoresis

      PLANTA
    40. Saurin, AJ; Shao, ZH; Erdjument-Bromage, H; Tempst, P; Kingston, RE
      A Drosophila Polycomb group complex includes Zeste and dTAFII proteins

      NATURE
    41. Rappsilber, J; Ajuh, P; Lamond, AI; Mann, M
      SPF30 is an essential human splicing factor required for assembly of the U4/U5/U6 tri-small nuclear ribonucleoprotein into the spliceosome

      JOURNAL OF BIOLOGICAL CHEMISTRY
    42. Huang, L; Jacob, RJ; Pegg, SCH; Baldwin, MA; Wang, CC; Burlingame, AL; Babbitt, PC
      Functional assignment of the 20 S proteasome from Trypanosoma brucei usingmass spectrometry and new bioinformatics approaches

      JOURNAL OF BIOLOGICAL CHEMISTRY
    43. Spouge, JL
      Finite-size corrections to Poisson approximations of rare events in renewal processes

      JOURNAL OF APPLIED PROBABILITY
    44. Laukens, K; Roef, L; Witters, E; Slegers, H; Van Onckelen, H
      Cyclic AMP affinity purification and ESI-QTOF MS-MS identification of cytosolic glyceraldehyde 3-phosphate dehydrogenase and two nucleoside diphosphate kinase isoforms from tobacco BY-2 cells

      FEBS LETTERS
    45. Shevchenko, A; Sunyaev, S; Loboda, A; Shevehenko, A; Bork, P; Ens, W; Standing, KG
      Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time of flight mass spectrometry and BLAST homology searching

      ANALYTICAL CHEMISTRY
    46. Baldwin, MA; Medzihradszky, KF; Lock, CM; Fisher, B; Settineri, TA; Burlingame, AL
      Matrix assisted laser desorption/ionization coupled with quadrupole/orthogonal acceleration time-of-flight mass spectrometry for protein discovery, identification, and structural analysis

      ANALYTICAL CHEMISTRY
    47. Cargile, BJ; McLuckey, SA; Stephenson, JL
      Identification of bacteriophage MS2 coat protein from E-coli lysates via ion trap collisional activation of intact protein ions

      ANALYTICAL CHEMISTRY
    48. Gobom, J; Schuerenberg, M; Mueller, M; Theiss, D; Lehrach, H; Nordhoff, E
      alpha-cyano-4-hydroxycinnamic acid affinity sample preparation. A protocolfor MALDI-MS peptide analysis in proteomics

      ANALYTICAL CHEMISTRY
    49. Hunter, TC; Yang, L; Zhu, HN; Majidi, V; Bradbury, EM; Chen, X
      Peptide mass mapping constrained with stable isotope-tagged peptides for identification of protein mixtures

      ANALYTICAL CHEMISTRY
    50. Loo, RRO; Cavalcoli, JD; VanBogelen, RA; Mitchell, C; Loo, JA; Moldover, B; Andrews, PC
      Virtual 2-D gel electrophoresis: Visualization and analysis of the E-coli proteome by mass spectrometry

      ANALYTICAL CHEMISTRY
    51. Li, LJ; Masselon, CD; Anderson, GA; Pasa-Tolic, L; Lee, SW; Shen, YF; Zhao, R; Lipton, MS; Conrads, TP; Tolic, N; Smith, RD
      High-throughput peptide identification from protein digests using data-dependent multiplexed tandem FTICR mass spectrometry coupled with capillary liquid chromatography

      ANALYTICAL CHEMISTRY
    52. Tanaka, Y; Sato, I; Iwai, C; Kosaka, T; Ikeda, T; Nakamura, T
      Identification of human liver diacetyl reductases by nano-liquid chromatography/Fourier transform ion cyclotron resonance mass spectrometry

      ANALYTICAL BIOCHEMISTRY
    53. Betts, JC; Dodson, P; Quan, S; Lewis, AP; Thomas, PJ; Duncan, K; McAdam, RA
      Comparison of the proteome of Mycobacterium tuberculosis strain H37Rv withclinical isolate CDC 1551

      MICROBIOLOGY-UK
    54. Moore, RE; Young, MK; Lee, TD
      Method for screening peptide fragment ion mass spectra prior to database searching

      JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
    55. Gao, HY; Shen, YF; Veenstra, TD; Harkewicz, R; Anderson, GA; Bruce, JE; Pasa-Tolic, L; Smith, RD
      Two-dimensional electrophoretic/chromatographic separations combined with electrospray ionization FTICR mass spectrometry for high throughput proteome analysis

      JOURNAL OF MICROCOLUMN SEPARATIONS
    56. Thiede, B; Lamer, S; Mattow, J; Siejak, F; Dimmler, C; Rudel, T; Jungblut, PR
      Analysis of missed cleavage sites, tryptophan oxidation and N-terminal pyroglutamylation after in-gel tryptic digestion

      RAPID COMMUNICATIONS IN MASS SPECTROMETRY
    57. Larsen, MR; Roepstorff, P
      Mass spectrometric identification of proteins and characterization of their post-translational modifications in proteome analysis

      FRESENIUS JOURNAL OF ANALYTICAL CHEMISTRY
    58. Ison, JC; Blades, MJ; Bleasby, AJ; Daniel, SC; Parish, JH; Findlay, JBC
      Key residues approach to the definition of protein families and analysis of sparse family signatures

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    59. Biunno, I; Bernard, L; Dear, P; Cattaneo, M; Volorio, S; Zannini, L; Bankier, A; Zollo, M
      SEL1L, the human homolog of C-elegans sel-1: refined physical mapping, gene structure and identification of polymorphic markers

      HUMAN GENETICS
    60. O'Neill, DW; Schoetz, SS; Lopez, RA; Castle, M; Rabinowitz, L; Shor, E; Krawchuk, D; Goll, MG; Renz, M; Seelig, HP; Han, S; Seong, RH; Park, SD; Agalioti, T; Munshi, N; Thanos, D; Erdjument-Bromage, H; Tempst, P; Bank, A
      An Ikaros-containing chromatin-remodeling complex in adult-type erythroid cells

      MOLECULAR AND CELLULAR BIOLOGY
    61. Ajuh, P; Kuster, B; Panov, K; Zomerdijk, JCBM; Mann, M; Lamond, AI
      Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry

      EMBO JOURNAL
    62. Corthals, GL; Wasinger, VC; Hochstrasser, DF; Sanchez, JC
      The dynamic range of protein expression: A challenge for proteomic research

      ELECTROPHORESIS
    63. Yan, JX; Wait, R; Berkelman, T; Harry, RA; Westbrook, JA; Wheeler, CH; Dunn, MJ
      A modified silver staining protocol for visualization of proteins compatible with matrix-assisted laser desorption/ionization and electrospray ionization-mass spectrometry

      ELECTROPHORESIS
    64. Lopez, MF; Berggren, K; Chernokalskaya, E; Lazarev, A; Robinson, M; Patton, WF
      A comparison of silver stain and SYPRO Ruby Protein Gel Stain with respectto protein detection in two-dimensional gels and identification by peptidemass profiling

      ELECTROPHORESIS
    65. Jung, E; Heller, M; Sanchez, JC; Hochstrasser, DF
      Proteomics meets cell biology: The establishment of subcellular proteomes

      ELECTROPHORESIS
    66. Yu, LR; Zeng, R; Shao, XX; Wang, N; Xu, YH; Xia, QC
      Identification of differentially expressed proteins between human hepatomaand normal liver cell lines by two-dimensional electrophoresis and liquid chromatography-ion trap mass spectrometry

      ELECTROPHORESIS
    67. Breen, EJ; Hopwood, FG; Williams, KL; Wilkins, MR
      Automatic Poisson peak harvesting for high throughput protein identification

      ELECTROPHORESIS
    68. Keough, T; Lacey, MP; Fieno, AM; Grant, RA; Sun, YP; Bauer, MD; Begley, KB
      Tandem mass spectrometry methods for definitive protein identification in proteomics research

      ELECTROPHORESIS
    69. Gevaert, K; Eggermont, L; Demol, H; Vandekerckhove, J
      A fast and convenient MALDI-MS based proteomic approach: identification ofcomponents scaffolded by the actin cytoskeleton of activated human thrombocytes

      JOURNAL OF BIOTECHNOLOGY
    70. Williams, C; Addona, TA
      The integration of SPR biosensors with mass spectrometry: possible applications for proteome analysis

      TRENDS IN BIOTECHNOLOGY
    71. Spector, A; Wang, RR; Ma, WC; Kleiman, NJ
      Development and characterization of an H2O2-resistant immortal lens epithelial cell line

      INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE
    72. Matsumoto, H; Komori, N
      Ocular proteomics: Cataloging photoreceptor proteins by two-dimensional gel electrophoresis and mass spectrometry

      VERTEBRATE PHOTOTRANSDUCTION AND THE VISUAL CYCLE, PT B
    73. Henikoff, S; Henikoff, JG
      Amino acid substitution matrices

      ADVANCES IN PROTEIN CHEMISTRY, VOL 54
    74. Chambers, G; Lawrie, L; Cash, P; Murray, GI
      Proteomics: a new approach to the study of disease

      JOURNAL OF PATHOLOGY
    75. Andersen, JS; Mann, M
      Functional genomics by mass spectrometry

      FEBS LETTERS
    76. Tsoka, S; Ouzounis, CA
      Recent developments and future directions in computational genomics

      FEBS LETTERS
    77. Nock, S; Wagner, P
      Proteomics: The post-genome revolution

      CHEMIE IN UNSERER ZEIT
    78. Mushegian, AR; Vishnivetskiy, SA; Gurevich, VV
      Conserved phosphoprotein interaction motif is functionally interchangeablebetween ataxin-7 and arrestins

      BIOCHEMISTRY
    79. Shevchenko, A; Loboda, A; Shevchenko, A; Ens, W; Standing, KG
      MALDI quadrupole time-of-flight mass spectrometry: A powerful tool for proteomic research

      ANALYTICAL CHEMISTRY
    80. Goodlett, DR; Bruce, JE; Anderson, GA; Rist, B; Pasa-Tolic, L; Fiehn, O; Smith, RD; Aebersold, R
      Protein identification with a single accurate mass of a cysteine-containing peptide and constrained database searching

      ANALYTICAL CHEMISTRY
    81. Borchers, C; Peter, JF; Hall, MC; Kunkel, TA; Tomer, KB
      Identification of in-gel digested proteins by complementary peptide mass fingerprinting and tandem mass spectrometry data obtained on an electrosprayionization quadrupole time-of-flight mass spectrometer

      ANALYTICAL CHEMISTRY
    82. Eriksson, J; Chait, BT; Fenyo, D
      A statistical basis for testing the significance of mass spectrometric protein identification results

      ANALYTICAL CHEMISTRY
    83. Geromanos, S; Freckleton, G; Tempst, P
      Tuning of an electrospray ionization source for maximum peptide-ion transmission into a mass spectrometer

      ANALYTICAL CHEMISTRY
    84. Kishiyama, A; Zhang, ZM; Henzel, WJ
      Cleavage and identification of proteins: A modified aspartyl-prolyl cleavage

      ANALYTICAL CHEMISTRY
    85. Schuerenbeg, M; Luebbert, C; Eickhoff, H; Kalkum, M; Lehrach, H; Nordhoff, E
      Prestructured MALDI-MS sample supports

      ANALYTICAL CHEMISTRY
    86. Zhang, WZ; Chait, BT
      Profound: An expert system for protein identification using mass spectrometric peptide mapping information

      ANALYTICAL CHEMISTRY
    87. Scordis, P; Flower, DR; Attwood, TK
      FingerPRINTScan: intelligent searching of the PRINTS motif database

      BIOINFORMATICS
    88. Wang, JH; Hewick, RM
      Proteomics in drug discovery

      DRUG DISCOVERY TODAY
    89. Gobom, J; Nordhoff, E; Mirgorodskaya, E; Ekman, R; Roepstorff, P
      Sample purification and preparation technique based on nano-scale reversed-phase columns for the sensitive analysis of complex peptide mixtures by matrix-assisted laser desorption/ionization mass spectrometry

      JOURNAL OF MASS SPECTROMETRY
    90. Chaurand, P; Luetzenkirchen, F; Spengler, B
      Peptide and protein identification by matrix-assisted laser desorption ionization (MALDI) and MALDI-post-source decay time-of-flight mass spectrometry

      JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
    91. Taylor, DL; Bruns, TD
      Community structure of ectomycorrhizal fungi in a Pinus muricata forest: minimal overlap between the mature forest and resistant propagule communities

      MOLECULAR ECOLOGY
    92. Jin, XY; Chen, YJ; Lubman, DM; Misek, D; Hanash, SM
      Capillary electrophoresis/tandem mass spectrometry for analysis of proteins from two-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis

      RAPID COMMUNICATIONS IN MASS SPECTROMETRY
    93. Jungblut, PR; Schaible, UE; Mollenkopf, HJ; Zimny-Arndt, U; Raupach, B; Mattow, J; Halada, P; Lamer, S; Hagens, K; Kaufmann, SHE
      Comparative proteome analysis of Mycobacterium tuberculosis and Mycobacterium bovis BCG strains: towards functional genomics of microbial pathogens

      MOLECULAR MICROBIOLOGY
    94. Aravind, L; Koonin, EV
      DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history

      NUCLEIC ACIDS RESEARCH
    95. Leipe, DD; Aravind, L; Koonin, EV
      Did DNA replication evolve twice independently?

      NUCLEIC ACIDS RESEARCH
    96. Cordwell, SJ
      Microbial genomes and "missing" enzymes: redefining biochemical pathways

      ARCHIVES OF MICROBIOLOGY
    97. Leclercq, M; Guimont-Ducamp, D
      Tools for studying proteomes

      BIOFUTUR
    98. May, ACW
      Towards more meaningful hierarchical classification of amino acid scoring matrices

      PROTEIN ENGINEERING
    99. Hiemstra, HS; van Veelen, PA; Geluk, A; Schloot, NC; de Vries, RRP; Ottenhoff, THM; Roep, BO; Drijfhout, JW
      Limitations of homology searching for identification of T-cell antigens with library derived mimicry epitopes

      VACCINE
    100. Godovac-Zimmermann, J; Soskic, V; Poznanovic, S; Brianza, F
      Functional proteomics of signal transduction by membrane receptors

      ELECTROPHORESIS


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Documento generato il 27/10/20 alle ore 17:36:06