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La ricerca find articoli where soggetti phrase all words 'SELF-CLEAVAGE' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 321 riferimenti
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    1. Lilley, DMJ
      Origins of RNA catalysis in the hairpin ribozyme

      CHEMBIOCHEM
    2. O'Rear, JL; Wang, SL; Feig, AL; Beigelman, L; Uhlenbeck, OC; Herschlag, D
      Comparison of the hammerhead cleavage reactions stimulated by monovalent and divalent cations

      RNA-A PUBLICATION OF THE RNA SOCIETY
    3. Stage-Zimmermann, TK; Uhlenbeck, OC
      A covalent crosslink converts the hammerhead ribozyme from a ribonuclease to an RNA ligase

      NATURE STRUCTURAL BIOLOGY
    4. Doherty, EA; Doudna, JA
      Ribozyme structures and mechanisms

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    5. Araki, M; Hashima, M; Okuno, Y; Sugiura, Y
      Coupling between substrate binding and allosteric regulation in ribozyme catalysis

      BIOORGANIC & MEDICINAL CHEMISTRY
    6. Lafarge, S; Sylvain, V; Ferrara, M; Bignon, YJ
      Inhibition of BRCA1 leads to increased chemoresistance to microtubule-interfering agents, an effect that involves the JNK pathway

      ONCOGENE
    7. Flores, R
      A naked plant-specific RNA ten-fold smaller than the smallest known viral RNA: the viroid

      COMPTES RENDUS DE L ACADEMIE DES SCIENCES SERIE III-SCIENCES DE LA VIE-LIFE SCIENCES
    8. Takagi, Y; Warashina, M; Stec, WJ; Yoshinari, K; Taira, K
      Recent advances in the elucidation of the mechanisms of action of ribozymes

      NUCLEIC ACIDS RESEARCH
    9. Lafontaine, DA; Norman, DG; Lilley, DMJ
      Structure, folding and activity of the VS ribozyme: importance of the 2-3-6 helical junction

      EMBO JOURNAL
    10. Hiley, SL; Collins, RA
      Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme

      EMBO JOURNAL
    11. Shih, IH; Been, MD
      Energetic contribution of non-essential 5 ' sequence to catalysis in a hepatitis delta virus ribozyme

      EMBO JOURNAL
    12. Michienzi, A; Rossi, JJ
      Intracellular applications of ribozymes

      RIBONUCLEASES, PT A
    13. Kierzek, R
      Nonenzymatic cleavage of oligoribonucleotides

      RIBONUCLEASES, PT A
    14. Albarino, CG; Price, BD; Eckerle, LD; Ball, LA
      Characterization and template properties of RNA dimers generated during flock house virus RNA replication

      VIROLOGY
    15. Andersen, AA; Collins, RA
      Intramolecular secondary structure rearrangement by the kissing interaction of the Neurospora VS ribozyme

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    16. Hammann, C; Norman, DG; Lilley, DMJ
      Dissection of the ion-induced folding of the hammerhead ribozyme using F-19 NMR

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    17. Sood, VD; Collins, RA
      Functional equivalence of the uridine turn and the hairpin as building blocks of tertiary structure in the Neurospora VS ribozyme

      JOURNAL OF MOLECULAR BIOLOGY
    18. Feldman, AR; Sen, D
      A new and efficient DNA enzyme for the sequence-specific cleavage of RNA

      JOURNAL OF MOLECULAR BIOLOGY
    19. Lafontaine, DA; Wilson, TJ; Norman, DG; Lilley, DMJ
      The A730 loop is an important component of the active site of the VS ribozyme

      JOURNAL OF MOLECULAR BIOLOGY
    20. Flinders, J; Dieckmann, T
      A pH controlled conformational switch in the cleavage site of the VS ribozyme substrate RNA

      JOURNAL OF MOLECULAR BIOLOGY
    21. Hammann, C; Cooper, A; Lilley, DMJ
      Thermodynamics of ion-induced RNA folding in the hammerhead ribozyme: An isothermal titration calorimetric study

      BIOCHEMISTRY
    22. Markley, JC; Godde, F; Sigurdsson, ST
      Identification and characterization of a divalent metal ion-dependent cleavage site in the hammerhead ribozyme

      BIOCHEMISTRY
    23. Lee, N; Suga, H
      Essential roles of innersphere metal ions for the formation of the glutamine binding site in a bifunctional ribozyme

      BIOCHEMISTRY
    24. Luptak, A; Ferre-D'Amare, AR; Zhou, KH; Zilm, KW; Doudna, JA
      Direct pK(a) measurement of the active-site cytosine in a genomic hepatitis delta virus ribozyme

      JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
    25. Tanabe, T; Takata, I; Kuwabara, T; Warashina, M; Kawasaki, H; Tani, K; Ohta, S; Asano, S; Taira, K
      Maxizymes, novel allosterically controllable ribozymes, can be designed tocleave various substrates

      BIOMACROMOLECULES
    26. Bibillo, A; Figlerowicz, M; Ziomek, K; Kierzek, R
      The nonenzymatic hydrolysis of oligoribonucleotides VII. Structural elements affecting hydrolysis.

      NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS
    27. Yim, SH; Park, I; Ahn, JK; Kang, CW
      Translational suppression by hammerhead ribozymes and inactive variants inS-cerevisiae

      BIOMOLECULAR ENGINEERING
    28. Nakamatsu, Y; Warashina, M; Kuwabara, T; Tanaka, Y; Yoshinari, K; Taira, K
      Significant activity of a modified ribozyme with N7-deazaguanine at G(10.1): the double-metal-ion mechanism of catalysis in reactions catalysed by hammerhead ribozymes

      GENES TO CELLS
    29. Michiels, PJA; Schouten, CHJ; Hilbers, CW; Heus, HA
      Structure of the ribozyme substrate hairpin of Neurospora VS RNA: A close look at the cleavage site

      RNA-A PUBLICATION OF THE RNA SOCIETY
    30. Zhao, ZY; Wilson, TJ; Maxwell, K; Lilley, DMJ
      The folding of the hairpin ribozyme: Dependence on the loops and the junction

      RNA-A PUBLICATION OF THE RNA SOCIETY
    31. Andersen, AA; Collins, RA
      Rearrangement of a stable RNA secondary structure during VS ribozyme catalysis

      MOLECULAR CELL
    32. Ferbeyre, G; Bourdeau, V; Pageau, M; Miramontes, P; Cedergren, R
      Distribution of hammerhead and hammerhead-like RNA motifs through the GenBank

      GENOME RESEARCH
    33. Deschenes, P; Lafontaine, DA; Charland, S; Perreault, JP
      Nucleotides-1 to-4 of hepatitis delta ribozyme substrate increase the specificity of ribozyme cleavage

      ANTISENSE & NUCLEIC ACID DRUG DEVELOPMENT
    34. Modahl, LE; Lai, MMC
      Hepatitis delta virus: The molecular basis of laboratory diagnosis

      CRITICAL REVIEWS IN CLINICAL LABORATORY SCIENCES
    35. Soukup, GA; Breaker, RR
      Allosteric nucleic acid catalysts

      CURRENT OPINION IN STRUCTURAL BIOLOGY
    36. Yoshinari, K; Taira, K
      A further investigation and reappraisal of the thio effect in the cleavagereaction catalyzed by a hammerhead ribozyme

      NUCLEIC ACIDS RESEARCH
    37. Wrzesinski, J; Legiewicz, M; Ciesiolka, J
      Mapping of accessible sites for oligonucleotide hybridization on hepatitisdelta virus ribozymes

      NUCLEIC ACIDS RESEARCH
    38. Chen, HH; Castanotto, D; LeBon, JM; Rossi, JJ; Riggs, AD
      In vivo, high-resolution analysis of yeast and mammalian RNA-protein interactions, RNA structure, RNA splicing and ribozyme cleavage by use of terminal transferase-dependent PCR

      NUCLEIC ACIDS RESEARCH
    39. Nishikawa, F; Nishikawa, S
      Requirement for canonical base pairing in the short pseudoknot structure of genomic hepatitis delta virus ribozyme

      NUCLEIC ACIDS RESEARCH
    40. Menger, M; Eckstein, F; Porschke, D
      Multiple conformational states of the hammerhead ribozyme, broad time range of relaxation and topology of dynamics

      NUCLEIC ACIDS RESEARCH
    41. Rojas, AA; Vazquez-Tello, A; Ferbeyre, G; Venanzetti, F; Bachmann, L; Paquin, B; Sbordoni, V; Cedergren, R
      Hammerhead-mediated processing of satellite pDo500 family transcripts fromDolichopoda cave crickets

      NUCLEIC ACIDS RESEARCH
    42. Li, J; Zheng, WC; Kwon, AH; Lu, Y
      In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme

      NUCLEIC ACIDS RESEARCH
    43. Navarro, JA; Flores, R
      Characterization of the initiation sites of both polarity strands of a viroid RNA reveals a motif conserved in sequence and structure

      EMBO JOURNAL
    44. Schroeder, R; Waldsich, C; Wank, H
      Modulation of RNA function by aminoglycoside antibiotics

      EMBO JOURNAL
    45. Hosaka, H; Hosono, K; Kawai, G; Takai, K; Takaku, H
      Self-cleavage of p2Sp1 RNA with Mg2+ and non-ionic detergent (Brij 58)

      JOURNAL OF INORGANIC BIOCHEMISTRY
    46. Hunsicker, LM; DeRose, VJ
      Activities and relative affinities of divalent metals in unmodified and phosphorothioate-substituted hammerhead ribozymes

      JOURNAL OF INORGANIC BIOCHEMISTRY
    47. Nakayama, A; Warashina, M; Kuwabara, T; Taira, K
      Effects of cetyltrimethylammonium bromide on reactions catalyzed by maxizymes, a novel class of metalloenzymes

      JOURNAL OF INORGANIC BIOCHEMISTRY
    48. Feig, AL
      The use of manganese as a probe for elucidating the role of magnesium ionsin ribozymes

      METAL IONS IN BIOLOGICAL SYSTEMS, VOL 37
    49. Lapham, J; Crothers, DM
      Site-specific cleavage of transcript RNA

      RNA-LIGAND INTERACTIONS PT A
    50. Leclerc, F; Llorente, B; Cedergren, R
      Structure-function relationships of RNA: A modeling approach

      RNA-LIGAND INTERACTIONS PT A
    51. Doherty, EA; Doudna, JA
      Ribozyme structures and mechanisms

      ANNUAL REVIEW OF BIOCHEMISTRY
    52. Reid, CE; Lazinski, DW
      A host-specific function is required for ligation of a wide variety of ribozyme-processed RNAs

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    53. Varnavski, AN; Young, PR; Khromykh, AA
      Stable high-level expression of heterologous genes in vitro and in vivo bynoncytopathic DNA-based Kunjin virus replicon vectors

      JOURNAL OF VIROLOGY
    54. Chang, JH; Moraleda, G; Gudima, S; Taylor, J
      Efficient site-specific nonribozyme opening of hepatitis delta virus genomic RNA in infected livers

      JOURNAL OF VIROLOGY
    55. Harris, RJ; Elder, D
      Ribozyme relationships: The hammerhead, hepatitis delta, and hairpin ribozymes have a common origin

      JOURNAL OF MOLECULAR EVOLUTION
    56. Chadalavada, DM; Knudsen, SM; Nakano, S; Bevilacqua, PC
      A role for upstream RNA structure in facilitating the catalytic fold of the genomic hepatitis delta virus ribozyme

      JOURNAL OF MOLECULAR BIOLOGY
    57. Wittberger, D; Berens, C; Hammann, C; Westhof, E; Schroeder, R
      Evaluation of uranyl photocleavage as a probe to monitor ion binding and flexibility in RNAs

      JOURNAL OF MOLECULAR BIOLOGY
    58. Komatsu, Y; Yamashita, S; Kazama, N; Nobuoka, K; Ohtsuka, E
      Construction of new ribozymes requiring short regulator oligonucleotides as a cofactor

      JOURNAL OF MOLECULAR BIOLOGY
    59. Soukup, GA; Emilsson, GAM; Breaker, RR
      Altering molecular recognition of RNA aptamers by allosteric selection

      JOURNAL OF MOLECULAR BIOLOGY
    60. Murray, JB; Scott, WG
      Does a single metal ion bridge the A-9 and scissile phosphate groups in the catalytically active hammerhead ribozyme structure?

      JOURNAL OF MOLECULAR BIOLOGY
    61. Ferre-D'Amare, AR; Doudna, JA
      Crystallization and structure determination of a hepatitis delta virus ribozyme: Use of the RNA-binding protein U1A as a crystallization module

      JOURNAL OF MOLECULAR BIOLOGY
    62. Komatsu, Y; Kanzaki, I; Shirai, M; Kumagai, I; Yamashita, S; Ohtsuka, E
      Functional domain-assembly in hairpin ribozymes

      JOURNAL OF BIOCHEMISTRY
    63. Suzumura, K; Warashina, M; Yoshinari, K; Tanaka, Y; Kuwabara, T; Orita, M; Taira, K
      Significant change in the structure of a ribozyme upon introduction of a phosphorothioate linkage at P9: NMR reveals a conformational fluctuation in the core region of a hammerhead ribozyme

      FEBS LETTERS
    64. Nashimoto, M
      Correct folding of a ribozyme induced by nonspecific macromolecules

      EUROPEAN JOURNAL OF BIOCHEMISTRY
    65. Sarzynska, J; Kulinski, T; Nilsson, L
      Conformational dynamics of a 5S rRNA hairpin domain containing loop D and a single nucleotide bulge

      BIOPHYSICAL JOURNAL
    66. Maderia, M; Hunsicker, LM; DeRose, VJ
      Metal-phosphate interactions in the hammerhead ribozyme observed by P-31 NMR and phosphorothioate substitutions

      BIOCHEMISTRY
    67. Ananvoranich, S; Perreault, JP
      The kinetics and magnesium requirements for the folding of antigenomic delta ribozymes

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    68. Lou, YC; Lin, IJ; Pai, MT; Cheng, JW
      Solution structure of an N-capping peptide from the N-terminal leucine-repeat region of hepatitis delta antigen

      ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
    69. Torres, RA; Bruice, TC
      The mechanism of phosphodiester hydrolysis: Near in-line attack conformations in the hammerhead ribozyme

      JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
    70. Tanaka, Y; Morita, EH; Hayashi, H; Kasai, Y; Tanaka, T; Taira, K
      Well-conserved tandem G center dot A pairs and the flanking C center dot Gpair in hammerhead ribozymes are sufficient for capture of structurally and catalytically important metal ions

      JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
    71. Morrissey, SR; Horton, TE; DeRose, VJ
      Mn2+ sites in the hammerhead ribozyme investigated by EPR and continuous-wave Q-band ENDOR spectroscopies

      JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
    72. Tor, Y
      RNA and the small molecule world

      ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
    73. Flores, R; Navarro, JA; de la Pena, M; Navarro, B; Ambros, S; Vera, A
      Viroids with hammerhead ribozymes: Some unique structural and functional aspects with respect to other members of the group

      BIOLOGICAL CHEMISTRY
    74. Walter, F; Vicens, Q; Westhof, E
      Aminoglycoside - RNA interactions

      CURRENT OPINION IN CHEMICAL BIOLOGY
    75. Shih, IH; Been, MD
      Ribozyme cleavage of a 2 ',5 '-phosphodiester linkage: Mechanism and a restricted divalent metal-ion requirement

      RNA-A PUBLICATION OF THE RNA SOCIETY
    76. Hansen, MR; Simorre, JP; Hanson, P; Mokler, V; Bellon, L; Beigelman, L; Pardi, A
      Identification and characterization of a novel high affinity metal-bindingsite in the hammerhead ribozyme

      RNA-A PUBLICATION OF THE RNA SOCIETY
    77. Soukup, GA; Breaker, RR
      Relationship between internucleotide linkage geometry and the stability ofRNA

      RNA-A PUBLICATION OF THE RNA SOCIETY
    78. Diegelman, AM; Kool, ET
      Mimicry of the hepatitis delta virus replication cycle mediated by synthetic circular oligodeoxynucleotides

      CHEMISTRY & BIOLOGY
    79. Rossi, JJ
      Ribozymes, genomics and therapeutics

      CHEMISTRY & BIOLOGY
    80. Feig, AL; Panek, M; Horrocks, WD; Uhlenbeck, OC
      Probing the binding of Tb(III) and Eu(III) to the hammerhead ribozyme using luminescence spectroscopy

      CHEMISTRY & BIOLOGY
    81. Ferre-d'Amare, AR; Doudna, JA
      RNA FOLDS: Insights from recent crystal structures

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    82. Soukup, GA; Breaker, RR
      Design of allosteric hammerhead ribozymes activated by ligand-induced structure stabilization

      STRUCTURE WITH FOLDING & DESIGN
    83. Kirk, SR; Tor, Y
      tRNA(Phe) binds aminoglycoside antibiotics

      BIOORGANIC & MEDICINAL CHEMISTRY
    84. Michael, K; Wang, H; Tor, Y
      Enhanced RNA binding of dimerized aminoglycosides

      BIOORGANIC & MEDICINAL CHEMISTRY
    85. Lilley, DMJ
      Structure, folding and catalysis of the small nucleolytic ribozymes

      CURRENT OPINION IN STRUCTURAL BIOLOGY
    86. Lin, IJ; Lou, YC; Pai, MT; Wu, HN; Cheng, JW
      Solution structure and RNA-binding activity of the N-terminal leucine-repeat region of hepatitis delta antigen

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    87. Roy, G; Ananvoranich, S; Perreault, JP
      Delta ribozyme has the ability to cleave in trans an mRNA

      NUCLEIC ACIDS RESEARCH
    88. Lafontaine, DA; Ananvoranich, S; Perreault, JP
      Presence of a coordinated metal ion in a trans-acting antigenomic delta ribozyme

      NUCLEIC ACIDS RESEARCH
    89. Diener, TO
      Viroids and the nature of viroid diseases

      ARCHIVES OF VIROLOGY
    90. Bravo, C; Woisard, A; Fourrey, JL; Laugaa, P; Favre, A
      A Y form of hammerhead ribozyme trapped by photo-cross-links retains full cleavage activity

      BIOCHIMIE
    91. Khan, AU; Lal, SK
      Ribozymes: structure and potential applications in medicine

      MEDICAL SCIENCE RESEARCH
    92. Soukup, GA; Breaker, RR
      Nucleic acid molecular switches

      TRENDS IN BIOTECHNOLOGY
    93. Hosono, K; Hosaka, H; Kawai, G; Takai, K; Takaku, H
      The stem hairpin loop structure of p2Sp1 RNA is required for RNA-cleaving activity

      BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION
    94. Gaughan, DJ; Whitehead, AS
      Function and biological applications of catalytic nucleic acids

      BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION
    95. Symons, RH; Randles, JW
      Encapsidated circular viroid-like satellite RNAs (virusoids) of plants

      SATELLITES AND DEFECTIVE VIRAL RNAS
    96. Taylor, JM
      Human hepatitis delta virus: An agent with similarities to certain satellite RNAs of plants

      SATELLITES AND DEFECTIVE VIRAL RNAS
    97. Taylor, JM
      Replication of human hepatitis delta virus: Influence of studies on subviral plant pathogens

      ADVANCES IN VIRUS RESEARCH, VOL 54
    98. Navarro, JA; Daros, JA; Flores, R
      Complexes containing both polarity strands of avocado sunblotch viroid: Identification in chloroplasts and characterization

      VIROLOGY
    99. Scott, WG
      Biophysical and biochemical investigations of RNA catalysis in the hammerhead ribozyme

      QUARTERLY REVIEWS OF BIOPHYSICS
    100. Soukup, GA; Breaker, RR
      Engineering precision RNA molecular switches

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA


ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 05/06/20 alle ore 05:28:22