Catalogo Articoli (Spogli Riviste)

HELP
ATTENZIONE: attualmente gli articoli Current Contents (fonte ISI) a partire dall'anno 2002 sono consultabili sulla Risorsa On-Line

Le informazioni sugli articoli di fonte ISI sono coperte da copyright

La ricerca find articoli where soggetti phrase all words 'PROTEIN-DNA INTERACTIONS' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 477 riferimenti
Si mostrano 100 riferimenti a partire da 1
Selezionare un intervallo

Per ulteriori informazioni selezionare i riferimenti di interesse.

    1. Brown, LM; Bruccoleri, RE; Novotny, J
      Empirical free energy analysis of the engrailed Q50K homeodomain mutant-DNA complex and its mutants

      JOURNAL OF MOLECULAR MODELING
    2. Zhong, DP; Pal, SK; Zewail, AH
      Femtosecond studies of protein - DNA binding and dynamics: Histone I

      CHEMPHYSCHEM
    3. Feingold, M
      Single-molecule studies of DNA and DNA-protein interactions

      PHYSICA E
    4. Kim, A; Murray, V
      Chromatin structure at the 3 '-boundary of the human beta-globin locus control region hypersensitive site-2

      INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
    5. Nazarenko, DA; Dertinger, SD; Gasiewicz, TA
      In Vivo antagonism of AhR-mediated gene induction by 3 '-methoxy4 '-nitroflavone in TCDD-responsive lacZ mice

      TOXICOLOGICAL SCIENCES
    6. Mischiati, C; Jeang, KT; Feriotto, G; Breda, L; Borgatti, M; Bianchi, N; Gambari, R
      Aromatic polyamidines inhibiting the Tat-induced HIV-1 transcription recognize structured TAR-RNA

      ANTISENSE & NUCLEIC ACID DRUG DEVELOPMENT
    7. Schurmann, A; Sokolowski, R; Haas, M; Wolfes, H
      Characterization of direct readout contacts of the Myb DNA-binding domain

      BLOOD CELLS MOLECULES AND DISEASES
    8. Schurmann, A; Sokolowski, R; Haas, M; Wolfes, H
      Characterization of direct readout contacts of the Myb DNA-binding domain

      BLOOD CELLS MOLECULES AND DISEASES
    9. Matikainen, T; Perez, GI; Jurisicova, A; Pru, JK; Schlezinger, JJ; Ryu, HY; Laine, J; Sakai, T; Korsmeyer, SJ; Casper, RF; Sherr, DH; Tilly, JL
      Aromatic hydrocarbon receptor-driven Bax gene expression is required for premature ovarian failure caused by biohazardous environmental chemicals

      NATURE GENETICS
    10. Bailey, MF; Thompson, EHZ; Millar, DP
      Probing DNA polymerase fidelity mechanisms using time-resolved fluorescence anisotropy

      METHODS
    11. Bell-Pedersen, D; Lewis, ZA; Loros, JJ; Dunlap, JC
      The Neurospora circadian clock regulates a transcription factor that controls rhythmic expression of the output eas(ccg-2) gene

      MOLECULAR MICROBIOLOGY
    12. Holmes, SG; Smith, MM
      Replication of minichromosomes in Saccharomyces cerevisiae is sensitive tohistone gene copy number and strain ploidy

      YEAST
    13. Calzuola, I; Gianfranceschi, GL; Marsili, V
      Binding citrate/DNA in presence of divalent cations - Potential mimicry ofacidic peptides/DNA interactions

      MOLECULAR BIOLOGY REPORTS
    14. Lee, A; Chalikian, TV
      Volumetric characterization of the hydration properties of heterocyclic bases and nucleosides

      BIOPHYSICAL CHEMISTRY
    15. Liang, TB; Chen, JQ; Tjornhammar, ML; Pongor, S; Simoncsits, A
      Modular construction of extended DNA recognition surfaces: mutant DNA-binding domains of the 434 repressor as building blocks

      PROTEIN ENGINEERING
    16. Sarkar, D; Radman-Livaja, M; Landy, A
      The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions

      EMBO JOURNAL
    17. Camacho, A; Salas, M
      Mechanism for the switch of phi 29 DNA early to late transcription by regulatory protein p4 and histone-like protein p6

      EMBO JOURNAL
    18. Allingham, JS; Wardle, SJ; Haniford, DB
      Determinants for hairpin formation in Tn10 transposition

      EMBO JOURNAL
    19. Trauger, JW; Dervan, PB
      Footprinting methods for analysis of pyrrole-imidazole polyamide/DNA complexes

      DRUG-NUCLEIC ACID INTERACTIONS
    20. Dillingham, MS; Soultanas, P; Wiley, P; Webb, MR; Wigley, DB
      Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    21. Mo, Y; Ho, W; Johnston, K; Marmorstein, R
      Crystal structure of a ternary SAP-1/SRF/c-fos SIRE DNA complex

      JOURNAL OF MOLECULAR BIOLOGY
    22. Smith, MA; Read, CM; Kneale, GG
      Domain structure and subunit interactions in the type I DNA methyltransferase M.EcoR1241

      JOURNAL OF MOLECULAR BIOLOGY
    23. Jezewska, MJ; Rajendran, S; Galletto, R; Bujalowski, W
      Kinetic mechanisms of rat polymerase beta-ssDNA interactions. Quantitativefluorescence stopped-flow analysis of the formation of the (Pol beta)(16) and (Pol beta)(5) ssDNA binding mode

      JOURNAL OF MOLECULAR BIOLOGY
    24. Bell, CE; Lewis, M
      Crystallographic analysis of Lac repressor bound to natural operator O1

      JOURNAL OF MOLECULAR BIOLOGY
    25. Sidorova, NY; Rau, DC
      Linkage of EcoRI dissociation from its specific DNA recognition site to water activity, salt concentration, and pH: Separating their roles in specific and non-specific binding

      JOURNAL OF MOLECULAR BIOLOGY
    26. Horvath, MP; Schultz, SC
      DNA G-quartets in a 1.86 angstrom resolution structure of an Oxytricha nova telomeric protein-DNA complex

      JOURNAL OF MOLECULAR BIOLOGY
    27. Holbrook, JA; Tsodikov, OV; Saecker, RM; Record, MT
      Specific and non-specific interactions of integration host factor with DNA: Thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding

      JOURNAL OF MOLECULAR BIOLOGY
    28. Singh, NN; Lambowitz, AM
      Interaction of a group II intron ribonucleoprotein endonuclease with its DNA target site investigated by DNA footprinting and modification interference

      JOURNAL OF MOLECULAR BIOLOGY
    29. Rajendran, S; Jezewska, MJ; Bujalowski, W
      Recognition of template-primer and gapped DNA substrates by the human DNA polymerase beta

      JOURNAL OF MOLECULAR BIOLOGY
    30. Calles, B; Monsalve, M; Rojo, F; Salas, M
      A mutation in the C-terminal domain of the RNA polymerase alpha subunit that destabilizes the open complexes formed at the phage phi 29 late A3 promoter

      JOURNAL OF MOLECULAR BIOLOGY
    31. Elnitski, L; Li, J; Noguchi, CT; Miller, W; Hardison, R
      A negative cis-element regulates the level of enhancement by hypersensitive site 2 of the beta-globin locus control region

      JOURNAL OF BIOLOGICAL CHEMISTRY
    32. Orsini, G; Kolb, A; Buc, H
      The Escherichia coli RNA polymerase center dot anti-sigma(70) AsiA complexutilizes alpha-carboxyl-terminal domain upstream promoter contacts to transcribe from a-10/-35 promoter

      JOURNAL OF BIOLOGICAL CHEMISTRY
    33. Kombo, DC; McConnell, KJ; Young, MA; Beveridge, DL
      Molecular dynamics simulation reveals sequence-intrinsic and protein-induced geometrical features of the OL1 DNA operator

      BIOPOLYMERS
    34. Komura, J; Ikehata, H; Hosoi, Y; Riggs, AD; Ono, T
      Mapping psoralen cross-links at the nucleotide level in mammalian cells: Suppression of cross-linking at transcription factor- or nucleosome-binding sites

      BIOCHEMISTRY
    35. Rodgers, JS; Hocker, JR; Hanas, RJ; Nwosu, EC; Hanas, JS
      Mercuric ion inhibition of eukaryotic transcription factor binding to DNA

      BIOCHEMICAL PHARMACOLOGY
    36. Kolaczkowski, SV; Perry, A; Mckenzie, A; Johnson, F; Budil, DE; Strauss, PR
      A spin-labeled abasic DNA substrate for AP endonuclease

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    37. Duhagon, MA; Dallagiovanna, B; Garat, B
      Unusual features of poly[dT-dG]center dot[dC-dA] stretches in CDS-flankingregions of Trypanosoma cruzi genome

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    38. Gao, L; Whitlock, JP
      Accessibility and activity of the promoter for a dioxin-inducible ecto-ATPase gene

      ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
    39. Maleknia, SD; Ralston, CY; Brenowitz, MD; Downard, KM; Chance, MR
      Determination of macromolecular folding and structure by synchrotron X-rayradiolysis techniques

      ANALYTICAL BIOCHEMISTRY
    40. Chang, TC; Lin, KC; Chiang, CC; Yang, YP; Chang, WS
      Satellite hole spectroscopy of thrombin-aptamer complexes

      CHEMBIOCHEM
    41. Kim, A; Murray, V
      A large "footprint" at the boundary of the human beta-globin locus controlregion hypersensitive site-2

      INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
    42. Aach, J; Rindone, W; Church, GM
      Systematic management and analysis of yeast gene expression data

      GENOME RESEARCH
    43. van Steensel, B; Henikoff, S
      Identification of in vivo DNA targets of chromatin proteins using tetheredDam methyltransferase

      NATURE BIOTECHNOLOGY
    44. Selinger, DW; Cheung, KJ; Mei, R; Johansson, EM; Richmond, CS; Blattner, FR; Lockhart, DJ; Church, GM
      RNA expression analysis using a 30 base pair resolution Escherichia coli genome array

      NATURE BIOTECHNOLOGY
    45. Wolfe, SA; Nekludova, L; Pabo, CO
      DNA recognition by Cys(2)His(2) zinc finger proteins

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    46. Jen-Jacobson, L; Engler, LE; Jacobson, LA
      Structural and thermodynamic strategies for site-specific DNA binding proteins

      STRUCTURE
    47. Parseghian, MH; Newcomb, RL; Winokur, ST; Hamkalo, BA
      The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: Distribution in human fetal fibroblasts

      CHROMOSOME RESEARCH
    48. Moss, DR; Laybourn, PJ
      Upstream nucleosomes and Rgr1p are required for nucleosomal repression of transcription

      MOLECULAR MICROBIOLOGY
    49. Vassetzky, Y; Hair, A; Mechali, N
      Rearrangement of chromatin domains during development in Xenopus

      GENES & DEVELOPMENT
    50. Fullerton, SM; Bond, J; Schneider, JA; Hamilton, B; Harding, RM; Boyce, AJ; Clegg, JB
      Polymorphism and divergence in the beta-globin replication origin initiation region

      MOLECULAR BIOLOGY AND EVOLUTION
    51. Vassetzky, YS; Bogdanova, AN; Razin, SV
      Analysis of the chicken DNA fragments that contain structural sites of attachment to the nuclear matrix: DNA-matrix interactions and replication

      JOURNAL OF CELLULAR BIOCHEMISTRY
    52. Ji, XJ; Liu, DP; Xu, DD; Li, L; Wang, J; Liang, CC
      Both locus control region and proximal regulatory elements direct the developmental regulation of beta-globin gene cluster

      JOURNAL OF CELLULAR BIOCHEMISTRY
    53. Pereira, LA; Bentley, K; Peeters, A; Churchill, MJ; Deacon, NJ
      A compilation of cellular transcription factor interactions with the HIV-1LTR promoter

      NUCLEIC ACIDS RESEARCH
    54. Kronenberg, S; Esser, C; Carlberg, C
      An aryl hydrocarbon receptor conformation acts as the functional core of nuclear dioxin signaling

      NUCLEIC ACIDS RESEARCH
    55. Eufemi, M; Ferraro, A; Altieri, F; Cervoni, L; Turano, C
      DNA-protein cross-linking in nuclei of immature and mature chicken erythrocytes

      MOLECULAR BIOLOGY REPORTS
    56. Fiedler, U; Timmers, HTM
      Peeling by binding or twisting by cranking: models for promoter opening and transcription initiation by RNA polymerase II

      BIOESSAYS
    57. Gavin, IM; Kladde, MP; Simpson, RT
      Tup1p represses Mcm1p transcriptional activation and chromatin remodeling of an a-cell-specific gene

      EMBO JOURNAL
    58. Soultanas, P; Dillingham, MS; Wiley, P; Webb, MR; Wigley, DB
      Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism

      EMBO JOURNAL
    59. Ahnert, P; Picha, KM; Patel, SS
      A ring-opening mechanism for DNA binding in the central channel of the T7 helicase-primase protein

      EMBO JOURNAL
    60. Ruscher, K; Reuter, M; Kupper, D; Trendelenburg, G; Dirnagl, U; Meisel, A
      A fluorescence based non-radioactive electrophoretic mobility shift assay

      JOURNAL OF BIOTECHNOLOGY
    61. Badawi, AF; Cavalieri, EL; Rogan, EG
      Effect of chlorinated hydrocarbons on expression of cytochrome P450 1A1, 1A2 and 1B1 and 2-and 4-hydroxylation of 17 beta-estradiol in female Sprague-Dawley rats

      CARCINOGENESIS
    62. Vogel, C; Boerboom, AMJF; Baechle, C; El-Bahay, C; Kahl, R; Degen, GH; Abel, J
      Regulation of prostaglandin endoperoxide H synthase-2 induction by dioxin in rat hepatocytes: possible c-Src-mediated pathway

      CARCINOGENESIS
    63. Ralston, CY; Sclavi, B; Sullivan, M; Deras, ML; Woodson, SA; Chance, MR; Brenowitz, M
      Time-resolved synchrotron X-ray footprinting and its application to RNA folding

      RNA-LIGAND INTERACTIONS PT A
    64. Brockman, JM; Nelson, BP; Corn, RM
      Surface plasmon resonance imaging measurements of ultrathin organic films

      ANNUAL REVIEW OF PHYSICAL CHEMISTRY
    65. Gittins, JR; Pellny, TK; Hiles, ER; Rosa, C; Biricolti, S; James, DJ
      Transgene expression driven by heterologous ribulose-1,5-bisphosphate carboxylase/oxygenase small-subunit gene promoters in the vegetative tissues ofapple (Malus pumila Mill.)

      PLANTA
    66. Mapp, AK; Ansari, AZ; Ptashne, M; Dervan, PB
      Activation of gene expression by small molecule transcription factors

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    67. de la Hoz, AB; Ayora, S; Sitkiewicz, I; Fernandez, S; Pankiewicz, R; Alonso, JC; Ceglowski, P
      Plasmid copy-number control and better-than-random segregation genes of pSM19035 share a common regulator

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    68. Vorob'eva, OV; Vasil'ev, SA; Karyagina, AS; Oretskaya, TS; Kubareva, EA
      Analysis of DNA-protein contacts in a complex between methyltransferase SsoII and a promoter region of the SsoII restriction-modification genes

      MOLECULAR BIOLOGY
    69. Su, SY; Gao, YG; Robinson, H; Liaw, YC; Edmondson, SP; Shriver, JW; Wang, AHJ
      Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs

      JOURNAL OF MOLECULAR BIOLOGY
    70. Pribil, PA; Haniford, DB
      Substrate recognition and induced DNA deformation by transposase at the target-capture stage of Tn10 transposition

      JOURNAL OF MOLECULAR BIOLOGY
    71. Phillips, K; Luisi, E
      The virtuoso of versatility: POU proteins that flex to fit

      JOURNAL OF MOLECULAR BIOLOGY
    72. Darling, PJ; Holt, JM; Ackers, GK
      Coupled energetics of lambda cro repressor self-assembly and site-specificDNA operator binding II: Cooperative interactions of cro dimers

      JOURNAL OF MOLECULAR BIOLOGY
    73. Charlier, D; Kholti, A; Huysveld, N; Gigot, D; Maes, D; Thia-Toong, TL; Glansdorff, N
      Mutational analysis of Escherichia coli PepA, a multifunctional DNA-binding aminopeptidase

      JOURNAL OF MOLECULAR BIOLOGY
    74. Berggrun, A; Sauer, RT
      Interactions of Arg2 in the Mnt N-terminal arm with the central and flanking regions of the mnt operator

      JOURNAL OF MOLECULAR BIOLOGY
    75. Bada, M; Walther, D; Arcangioli, B; Doniach, S; Delarue, M
      Solution structural studies and low-resolution model of the Schizosaccharomyces pombe sap1 protein

      JOURNAL OF MOLECULAR BIOLOGY
    76. Reddy, YVR; Rao, DN
      Binding of EcoP15I DNA methyltransferase to DNA reveals a large structuraldistortion within the recognition sequence

      JOURNAL OF MOLECULAR BIOLOGY
    77. Hsu, ST; Chou, MT; Chou, SH; Huang, WC; Cheng, JW
      Hydration of [d(CGC)r(aaa)d(TTTGCG)](2)

      JOURNAL OF MOLECULAR BIOLOGY
    78. Saha, S; Kapler, GM
      Allele-specific protein-DNA interactions between the single-stranded DNA-binding protein, ssA-TIBF, and DNA replication determinants in Tetrahymena

      JOURNAL OF MOLECULAR BIOLOGY
    79. Jeon, MS; Esser, C
      The murine IL-2 promoter contains distal regulatory elements responsive tothe Ah receptor, a member of the evolutionarily conserved bHLH-PAS transcription factor family

      JOURNAL OF IMMUNOLOGY
    80. Ma, Q; Renzelli, AJ; Baldwin, KT; Antonini, JM
      Superinduction of CYP1A1 gene expression - Regulation of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced degradation of Ah receptor by cycloheximide

      JOURNAL OF BIOLOGICAL CHEMISTRY
    81. Esperon, P; Gorfinkiel, N; Garat, B; Ehrlich, R
      Characterisation of the proximal regulatory domain of the Echinococcus granulosus homeodomain-containing gene EgHbx1

      INTERNATIONAL JOURNAL FOR PARASITOLOGY
    82. Stein, GS; Montecino, M; van Wijnen, AJ; Stein, JL; Lian, JB
      Nuclear structure-gene expression interrelationships: Implications for aberrant gene expression in cancer

      CANCER RESEARCH
    83. Kombo, DC; Young, MA; Beveridge, DL
      One nanosecond molecular dynamics simulation of the N-terminal domain of the lambda repressor protein

      BIOPOLYMERS
    84. Cayley, DS; Guttman, HJ; Record, MT
      Biophysical characterization of changes in amounts and activity of Escherichia coli cell and compartment water and turgor pressure in response to osmotic stress

      BIOPHYSICAL JOURNAL
    85. Novikov, VV; Kuvichkin, VV; Novikova, NI; Fesenko, EE
      Effect of weak magnetic fields on the capacity of some proteins and polyamino acids to form complexes with DNA

      BIOFIZIKA
    86. Chaulk, SG; Pezacki, JP; MacMillan, AM
      Studies of RNA cleavage by photolysis of N-hydroxypyridine-2(1H)-thione. Anew photochemical footprinting method

      BIOCHEMISTRY
    87. Supakar, PC; Fujita, T; Maruyama, N
      Identification of novel sequence-specific nuclear factors interacting withmouse senescence marker protein-30 gene promoter

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    88. Singhal, RP; Otim, O
      DNA annealing and DNA-protein interactions by capillary electrophoresis

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    89. Wood, JM
      Osmosensing by bacteria: Signals and membrane-based sensors

      MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
    90. Nordhoff, E; Krogsdam, AM; Jorgensen, HF; Kallipolitis, BH; Clark, BFC; Roepstorff, P; Kristiansen, K
      Rapid identification of DNA-binding proteins by mass spectrometry

      NATURE BIOTECHNOLOGY
    91. Bulyk, ML; Gentalen, E; Lockhart, DJ; Church, GM
      Quantifying DNA-protein interactions by double-stranded DNA arrays

      NATURE BIOTECHNOLOGY
    92. Wolberger, C
      Multiprotein-DNA complexes in transcriptional regulation

      ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE
    93. Shekhtman, A; McNaughton, L; Cunningham, RP; Baxter, SM
      Identification of the Archaeoglobus fulgidus endonuclease III DNA interaction surface using heteronuclear NMR methods

      STRUCTURE WITH FOLDING & DESIGN
    94. Pan, CQ; Lazarus, RA
      Ca2+-dependent activity of human DNase I and its hyperactive variants

      PROTEIN SCIENCE
    95. Simpson, RT
      In vivo methods to analyze chromatin structure

      CURRENT OPINION IN GENETICS & DEVELOPMENT
    96. Daftari, P; Gavva, NR; Shen, CKJ
      Distinction between AP1 and NF-E2 factor-binding at specific chromatin regions in mammalian cells

      ONCOGENE
    97. Viter, S; Shaw, KJ; Gennaro, ML
      HSa of Staphylococcus aureus, a new member of the HU family of bacterial histone-like proteins

      RESEARCH IN MICROBIOLOGY
    98. Landis, L; Xu, JM; Johnson, RC
      The cAMP receptor protein CRP can function as an osmoregulator of transcription in Escherichia coli

      GENES & DEVELOPMENT
    99. Mazin, AV; Kowalczykowski, SC
      A novel property of the RecA nucleoprotein filament: activation of double-stranded DNA for strand exchange in trans

      GENES & DEVELOPMENT
    100. Hopyan, S; Gokgoz, N; Bell, RS; Andrulis, IL; Alman, BA; Wunder, JS
      Expression of osteocalcin and its transcriptional regulators core-binding factor alpha 1 and MSX2 in osteoid-forming tumours

      JOURNAL OF ORTHOPAEDIC RESEARCH


ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 07/08/20 alle ore 12:14:12