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La ricerca find articoli where soggetti phrase all words 'MULTIPLE ALIGNMENTS' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 67 riferimenti
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    1. Miller, W
      Comparison of genomic DNA sequences: solved and unsolved problems

      BIOINFORMATICS
    2. Heger, A; Holm, L
      Picasso: generating a covering set of protein family profiles

      BIOINFORMATICS
    3. Husmeier, D; Wright, F
      Detection of recombination in DNA multiple alignments with hidden Markov models

      JOURNAL OF COMPUTATIONAL BIOLOGY
    4. Rost, B
      Review: Protein secondary structure prediction continues to rise

      JOURNAL OF STRUCTURAL BIOLOGY
    5. Califano, A
      Advances in sequence analysis

      CURRENT OPINION IN STRUCTURAL BIOLOGY
    6. Tieleman, DP; Shrivastava, IH; Ulmschneider, MR; Sansom, MSP
      Proline-induced hinges in transmembrane helices: Possible roles in ion channel gating

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    7. Hardison, RC; Chui, DHK; Riemer, C; Giardine, B; Lehvaslaiho, H; Wajcman, H; Miller, W
      Databases of human hemoglobin variants and other resources at the globin gene server

      HEMOGLOBIN
    8. Ranatunga, KM; Law, RJ; Smith, GR; Sansom, MSP
      Electrostatics studies and molecular dynamics simulations of a homology model of the Shaker K+ channel pore

      EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS
    9. Shiu, SH; Bleecker, AB
      Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    10. Hua, SJ; Sun, ZR
      A novel method of protein secondary structure prediction with high segmentoverlap measure: Support vector machine approach

      JOURNAL OF MOLECULAR BIOLOGY
    11. Bond, CS; White, MF; Hunter, WN
      High resolution structure of the phosphohistidine-activated form of Escherichia coli cofactor-dependent phosphoglycerate mutase

      JOURNAL OF BIOLOGICAL CHEMISTRY
    12. Deleage, G; Combet, C; Blanchet, C; Geourjon, C
      ANTHEPROT: An integrated protein sequence analysis software with client/server capabilities

      COMPUTERS IN BIOLOGY AND MEDICINE
    13. Ulmschneider, MB; Sansom, MSP
      Amino acid distributions in integral membrane protein structures

      BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
    14. Searls, DB
      Bioinformatics tools for whole genomes

      ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS
    15. Pleiss, J; Fischer, M; Peiker, M; Thiele, C; Schmid, RD
      Lipase engineering database - Understanding and exploiting sequence-structure-function relationships

      JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC
    16. Ng, PC; Henikoff, JG; Henikoff, S
      PHAT: a transmembrane-specific substitution matrix

      BIOINFORMATICS
    17. Henikoff, JG; Henikoff, S
      Drosophila genomic sequence annotation using the BLOCKS plus database

      GENOME RESEARCH
    18. McGuire, G; Wright, F; Prentice, MJ
      A Bayesian model for detecting past recombination events in DNA multiple alignments

      JOURNAL OF COMPUTATIONAL BIOLOGY
    19. Schmidler, SC; Liu, JS; Brutlag, DL
      Bayesian segmentation of protein secondary structure

      JOURNAL OF COMPUTATIONAL BIOLOGY
    20. Kashiwabara, S; Azuma, S; Tsuduki, M; Suzuki, Y
      The primary structure of the subunit in Bacillus thermoamyloliquefaciens KP1071 molecular weight 540,000 homohexameric alpha-glucosidase II belongingto the glycosyl hydrolase family 31

      BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
    21. Castresana, J
      Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

      MOLECULAR BIOLOGY AND EVOLUTION
    22. Henikoff, JG; Pietrokovski, S; McCallum, CM; Henikoff, S
      Blocks-based methods for detecting protein homology

      ELECTROPHORESIS
    23. Morgan, K; Stevens, EB; Shah, B; Cox, PJ; Dixon, AK; Lee, K; Pinnock, RD; Hughes, J; Richardson, PJ; Mizuguchi, K; Jackson, AP
      beta 3: An additional auxiliary subunit of the voltage-sensitive sodium channel that modulates channel gating with distinct kinetics

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    24. Subramanian, G; Koonin, EV; Aravind, L
      Comparative genome analysis of the pathogenic spirochetes Borrelia burgdorferi and Treponema pallidum

      INFECTION AND IMMUNITY
    25. Chevalier, N; Rigden, DJ; Van Roy, J; Opperdoes, FR; Michels, PAM
      Trypanosoma brucei contains a 2,3-bisphosphoglycerate independent phosphoglycerate mutase

      EUROPEAN JOURNAL OF BIOCHEMISTRY
    26. Capener, CE; Shrivastava, IH; Ranatunga, KM; Forrest, LR; Smith, GR; Sansom, MSP
      Homology modeling and molecular dynamics simulation studies of an inward rectifier potassium channel

      BIOPHYSICAL JOURNAL
    27. Shrivastava, IH; Capener, CE; Forrest, LR; Sansom, MSP
      Structure and dynamics of K channel pore-lining helices: A comparative simulation study

      BIOPHYSICAL JOURNAL
    28. Debe, DA; Carlson, MJ; Sadanobu, J; Chan, SI; Goddard, WA
      Protein fold determination from sparse distance restraints: The RestrainedGeneric Protein Direct Monte Carlo method

      JOURNAL OF PHYSICAL CHEMISTRY B
    29. Tiwari, S; Reddy, BVB
      A statistical analytical approach to predict the secondary structure of proteins from amino acid sequence information

      THEORETICAL CHEMISTRY ACCOUNTS
    30. Rittinger, K; Budman, J; Xu, JA; Volinia, S; Cantley, LC; Smerdon, SJ; Gamblin, SJ; Yaffe, MB
      Structural analysis of 14-3-3 phosphopeptide complexes identifies a dual role for the nuclear export signal of 14-3-3 in ligand binding

      MOLECULAR CELL
    31. Arias, CA; Martin-Martinez, M; Blundell, TL; Arthur, M; Courvalin, P; Reynolds, PE
      Characterization and modelling of VanT: a novel, membrane-bound, serine racemase from vancomycin-resistant Enterococcus gallinarum BM4174

      MOLECULAR MICROBIOLOGY
    32. Kashiwabara, S; Ogawa, S; Miyoshi, N; Oda, M; Suzuki, Y
      Three domains comprised in thermostable molecular weight 54,000 pullulanase of type I from Bacillus flavocaldarius KP1228

      BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
    33. Ortiz, AR; Kolinski, A; Rotkiewicz, P; Ilkowski, B; Skolnick, J
      Ab initio folding of proteins using restraints derived from evolutionary information

      PROTEINS-STRUCTURE FUNCTION AND GENETICS
    34. Gromiha, MM
      A simple method for predicting transmembrane alpha helices with better accuracy

      PROTEIN ENGINEERING
    35. Fariselli, P; Casadio, R
      A neural network based predictor of residue contacts in proteins

      PROTEIN ENGINEERING
    36. Bezerra, IC; Resende, RD; Pozzer, L; Nagata, T; Kormelink, R; De Avila, AC
      Increase of tospoviral diversity in Brazil with the identification of two new tospovirus species, one from chrysanthemum and one from zucchini

      PHYTOPATHOLOGY
    37. Sutcliffe, MJ; Smeeton, AH; Wo, ZG; Oswald, RE
      Three-dimensional models of glutamate receptors

      Faraday discussions
    38. PADILLAZUNIGA AJ; ROJODOMINGUEZ A
      NON-HOMOLOGY KNOWLEDGE-BASED PREDICTION OF THE PAPAIN PROSEGMENT FOLDING PATTERN - A DESCRIPTION OF PLAUSIBLE FOLDING AND ACTIVATION MECHANISMS

      Folding & design
    39. Gracy, J; Argos, P
      DOMO: a new database of aligned protein domains

      TRENDS IN BIOCHEMICAL SCIENCES
    40. SUTCLIFFE MJ; SMEETON AH; WO ZG; OSWALD RE
      3-DIMENSIONAL MODELS OF GLUTAMATE RECEPTORS

      Biochemical Society transactions
    41. SANSOM MSP; KERR ID; LAW R; DAVISON L; TIELEMAN DP
      MODELING THE PACKING OF TRANSMEMBRANE HELICES - APPLICATION TO AQUAPORIN-1

      Biochemical Society transactions
    42. Gerstein, M; Hegyi, H
      Comparing genomes in terms of protein structure: surveys of a finite partslist

      FEMS MICROBIOLOGY REVIEWS
    43. OLSZEWSKI KA
      AB-INITIO PROTEIN-FOLDING - IS CONFORMATIONAL SPACE SEARCHING ENOUGH

      Polish Journal of Chemistry
    44. STUART JK; MYSZKA DG; JOSS L; MITCHELL RS; MCDONALD SM; XIE ZH; TAKAYAMA S; REED JC; ELY KR
      CHARACTERIZATION OF INTERACTIONS BETWEEN THE ANTI-APOPTOTIC PROTEIN BAG-1 AND HSC70 MOLECULAR CHAPERONES

      The Journal of biological chemistry
    45. THOMPSON MJ; GOLDSTEIN RA
      PREDICTING PROTEIN SECONDARY STRUCTURE WITH PROBABILISTIC SCHEMATA OFEVOLUTIONARILY DERIVED INFORMATION

      Protein science
    46. SHEARMAN LP; ZYLKA MJ; WEAVER DR; KOLAKOWSKI LF; REPPERT SM
      2 PERIOD HOMOLOGS - CIRCADIAN EXPRESSION AND PHOTIC REGULATION IN THESUPRACHIASMATIC NUCLEI

      Neuron
    47. ROST B
      BETTER 1D PREDICTIONS BY EXPERTS WITH MACHINES

      Proteins
    48. DELEAGE G; BLANCHET C; GEOURJON C
      PROTEIN-STRUCTURE PREDICTION - IMPLICATIONS FOR THE BIOLOGIST

      Biochimie
    49. PERSSON B; ARGOS P
      PREDICTION OF MEMBRANE-PROTEIN TOPOLOGY UTILIZING MULTIPLE SEQUENCE ALIGNMENTS

      Journal of protein chemistry
    50. TAYLOR WR
      RESIDUAL COLORS - A PROPOSAL FOR AMINOCHROMOGRAPHY

      Protein engineering
    51. CHELVANAYAGAM G; EGGENSCHWILER A; KNECHT L; GONNET GH; BENNER SA
      AN ANALYSIS OF SIMULTANEOUS VARIATION IN PROTEIN STRUCTURES

      Protein engineering
    52. LUND O; FRIMAND K; GORODKIN J; BOHR H; BOHR J; HANSEN J; BRUNAK S
      PROTEIN DISTANCE CONSTRAINTS PREDICTED BY NEURAL NETWORKS AND PROBABILITY DENSITY-FUNCTIONS

      Protein engineering
    53. RYCHLEWSKI L; GODZIK A
      SECONDARY STRUCTURE PREDICTION USING SEGMENT SIMILARITY

      Protein engineering
    54. ROST B; ODONOGHUE S
      SISYPHUS AND PREDICTION OF PROTEIN-STRUCTURE

      Computer applications in the biosciences
    55. DOSZTANYI Z; FISER A; SIMON I
      STABILIZATION CENTERS IN PROTEINS - IDENTIFICATION, CHARACTERIZATION AND PREDICTIONS

      Journal of Molecular Biology
    56. SAKANARI JA; NADLER SA; CHAN VJ; ENGEL JC; LEPTAK C; BOUVIER J
      LEISHMANIA-MAJOR - COMPARISON OF THE CATHEPSIN-L-LIKE AND CATHEPSIN-B-LIKE CYSTEINE PROTEASE GENES WITH THOSE OF OTHER TRYPANOSOMATIDS

      Experimental parasitology
    57. ROST B; SANDER C
      BRIDGING THE PROTEIN SEQUENCE-STRUCTURE GAP BY STRUCTURE PREDICTIONS

      Annual review of biophysics and biomolecular structure
    58. THOMAS DJ; CASARI G; SANDER C
      THE PREDICTION OF PROTEIN CONTACTS FROM MULTIPLE SEQUENCE ALIGNMENTS

      Protein engineering
    59. DEFAY TR; COHEN FE
      MULTIPLE SEQUENCE INFORMATION FOR THREADING ALGORITHMS

      Journal of Molecular Biology
    60. ROST B; CASADIO R; FARISELLI P; SANDER C
      TRANSMEMBRANE HELICES PREDICTED AT 95-PERCENT ACCURACY

      Protein science
    61. REMOND M; SHELDRICK P; LEBRETON F; FOULON T
      SEQUENCE OF THE CANINE HERPESVIRUS THYMIDINE KINASE GENE - TAXON-PREFERRED AMINO-ACID-RESIDUES IN THE ALPHAHERPESVIRAL THYMIDINE KINASES

      Virus research
    62. HAN KF; BAKER D
      RECURRING LOCAL SEQUENCE MOTIFS IN PROTEINS

      Journal of Molecular Biology
    63. HENIKOFF S; HENIKOFF JG
      PROTEIN FAMILY CLASSIFICATION BASED ON SEARCHING A DATABASE OF BLOCKS

      Genomics
    64. REST B; SANDER C
      CONSERVATION AND PREDICTION OF SOLVENT ACCESSIBILITY IN PROTEIN FAMILIES

      Proteins
    65. BALDI P; CHAUVIN Y; HUNKAPILLER T; MCCLURE MA
      HIDDEN MARKOV-MODELS OF BIOLOGICAL PRIMARY SEQUENCE INFORMATION

      Proceedings of the National Academy of Sciences of the United Statesof America
    66. KROGH A; BROWN M; MIAN IS; SJOLANDER K; HAUSSLER D
      HIDDEN MARKOV-MODELS IN COMPUTATIONAL BIOLOGY - APPLICATIONS TO PROTEIN MODELING

      Journal of Molecular Biology
    67. ROST B; SANDER C
      PREDICTION OF PROTEIN SECONDARY STRUCTURE AT BETTER THAN 70-PERCENT ACCURACY

      Journal of Molecular Biology


ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 15/08/20 alle ore 16:43:41