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La ricerca find articoli where soggetti phrase all words 'BACTERIOPHAGE-T4' sort by level,fasc_key/DESCEND, pagina_ini_num/ASCEND ha restituito 623 riferimenti
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    1. Ramanculov, E; Young, R
      Functional analysis of the phage T4 holin in a lambda context

      MOLECULAR GENETICS AND GENOMICS
    2. Lindahl, E; Hess, B; van der Spoel, D
      GROMACS 3.0: a package for molecular simulation and trajectory analysis

      JOURNAL OF MOLECULAR MODELING
    3. Green, RJ; Su, TJ; Lu, JR; Webster, JRP
      The displacement of preadsorbed protein with a cationic surfactant at the hydrophilic SiO2-water interface

      JOURNAL OF PHYSICAL CHEMISTRY B
    4. Cho, KB; Himo, F; Graslund, A; Siegbahn, PEM
      The substrate reaction mechanism of class III anaerobic ribonucleotide reductase

      JOURNAL OF PHYSICAL CHEMISTRY B
    5. de Kort, M; de Visser, PC; Kurzeck, J; Meeuwenoord, NJ; van der Marel, GA; Ruger, W; van Boom, JH
      Chemical and enzymatic synthesis of DNA fragments containing 5-(beta-D-glucopyranosyloxymethyl)-2 '-deoxycytidine - a modified nucleoside in T4 phageDNA

      EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
    6. van Raaij, MJ; Schoehn, G; Jaquinod, M; Ashman, K; Burda, MR; Miller, S
      Identification and crystallisation of a heat- and protease-stable fragmentof the bacteriophage T4 short tail fibre

      BIOLOGICAL CHEMISTRY
    7. Schaaper, RM; Dunn, RL
      The antimutator phenotype of E-coli mud is only apparent and results from delayed appearance of mutants

      MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
    8. Xu, H; Hoover, TR
      Transcriptional regulation at a distance in bacteria

      CURRENT OPINION IN MICROBIOLOGY
    9. Ronaghi, M
      Pyrosequencing sheds light on DNA sequencing

      GENOME RESEARCH
    10. Kawai, M; Lee, MJ; Evans, KO; Nordlund, TM
      Temperature and base sequence dependence of 2-aminopurine fluorescence bands in single- and double-stranded oligodeoxynucleotides

      JOURNAL OF FLUORESCENCE
    11. Morris, PD; Tackett, AJ; Raney, KD
      Biotin-streptavidin-labeled oligonucleotides as probes of helicase mechanisms

      METHODS
    12. Larsson, KM; Andersson, J; Sjoberg, BM; Nordlund, P; Logan, DT
      Structural basis for allosteric substrate specificity regulation in anaerobic ribonucleotide reductases

      STRUCTURE
    13. Shaw, KL; Grimsley, GR; Yakovlev, GI; Makarov, AA; Pace, CN
      The effect of net charge on the solubility, activity, and stability of ribonuclease Sa

      PROTEIN SCIENCE
    14. Xu, J; Baase, WA; Quillin, ML; Baldwin, EP; Matthews, BW
      Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme

      PROTEIN SCIENCE
    15. Brych, SR; Blaber, SI; Logan, TM; Blaber, M
      Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil

      PROTEIN SCIENCE
    16. Ramanculov, E; Young, R
      An ancient player unmasked: T4 rl encodes a t-specific antiholin

      MOLECULAR MICROBIOLOGY
    17. Kwak, JE; Lee, JY; Han, BW; Moon, JH; Sohn, SH; Park, IS; Kim, BG; Suh, SW
      Crystallization and preliminary X-ray crystallographic analysis of RNase HIII from Bacillus subtilis

      ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
    18. Qu, CX; Akanuma, S; Tanaka, N; Moriyama, H; Ohsima, T
      Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus

      ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
    19. Burkett, SL; Read, MJ
      Adsorption-induced conformational changes of alpha-helical peptides

      LANGMUIR
    20. Sengupta, TK; Gordon, J; Spicer, EK
      RegA proteins from phage T4 and RB69 have conserved helix-loop groove RNA binding motifs but different RNA binding specificities

      NUCLEIC ACIDS RESEARCH
    21. Franklin, MC; Wang, JM; Steitz, TA
      Structure of the replicating complex of a pol alpha family DNA polymerase

      CELL
    22. von Hippel, PH; Delagouette, E
      A general model for nucleic acid helicases and their "coupling" within macromolecular machines

      CELL
    23. Benkovic, SJ; Valentine, AM; Salinas, F
      Replisome-mediated DNA replication

      ANNUAL REVIEW OF BIOCHEMISTRY
    24. Olson, NH; Gingery, M; Eiserling, FA; Baker, TS
      The structure of isometric capsids of bacteriophage T4

      VIROLOGY
    25. Conway, JF; Wikoff, WR; Cheng, N; Duda, RL; Hendrix, RW; Johnson, JE; Steven, AC
      Virus maturation involving large subunit rotations and local refolding

      SCIENCE
    26. Thomas, ST; Loladze, VV; Makhatadze, GI
      Hydration of the peptide backbone largely defines the thermodynamic propensity scale of residues at the C ' position of the C-capping box of alpha-helices

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    27. Bleuit, JS; Xu, H; Ma, YJ; Wang, TS; Liu, J; Morrical, SW
      Mediator proteins orchestrate enzyme-ssDNA assembly during T4 recombination-dependent DNA replication and repair

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    28. Kuzminov, A
      DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    29. Malygin, EG; Ovechkina, LG; Evdokimov, AA; Zinoviev, VV
      Single turnover kinetics of methylation by T4 DNA-(N6-adenine)-methyltransferase

      MOLECULAR BIOLOGY
    30. Krasnykh, V; Belousova, N; Korokhov, N; Mikheeva, G; Curiel, DT
      Genetic targeting of an adenovirus vector via replacement of the fiber protein with the phage T4 fibritin

      JOURNAL OF VIROLOGY
    31. Sarisky, RT; Quail, MR; Clark, PE; Nguyen, TT; Halsey, WS; Wittrock, RJ; Bartus, JO; Van Horn, MM; Sathe, GM; Van Horn, S; Kelly, MD; Bacon, TH; Leary, JJ
      Characterization of herpes simplex viruses selected in culture for resistance to penciclovir or acyclovir

      JOURNAL OF VIROLOGY
    32. Buerger, I; Reefschlaeger, J; Bender, W; Eckenberg, P; Popp, A; Weber, O; Graeper, S; Klenk, HD; Ruebsamen-Waigmann, H; Hallenberger, S
      A novel nonnucleoside inhibitor specifically targets cytomegalovirus DNA maturation via the UL89 and UL56 gene products

      JOURNAL OF VIROLOGY
    33. Carter, CW; LeFebvre, BC; Cammer, SA; Tropsha, A; Edgell, MH
      Four-body potentials reveal protein-specific correlations to stability changes caused by hydrophobic core mutations

      JOURNAL OF MOLECULAR BIOLOGY
    34. Vuthoori, S; Bowers, CW; McCracken, A; Dombroski, AJ; Hinton, DM
      Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes

      JOURNAL OF MOLECULAR BIOLOGY
    35. Chasman, D; Adams, RM
      Predicting the functional consequences of non-synonymous single nucleotidepolymorphisms: Structure-based assessment of amino acid variation

      JOURNAL OF MOLECULAR BIOLOGY
    36. Minakhin, L; Camarero, JA; Holford, M; Parker, C; Muir, TW; Severinov, K
      Mapping the molecular interface between the sigma(70) subunit of E-coli RNA polymerase and T4 AsiA

      JOURNAL OF MOLECULAR BIOLOGY
    37. Penel, S; Doig, AJ
      Rotamer strain energy in protein helices quantification of a major force opposing protein folding

      JOURNAL OF MOLECULAR BIOLOGY
    38. Urbauer, JL; Adelman, K; Urbauer, RJB; Simeonov, MF; Gilmore, JM; Zolkiewski, M; Brody, EN
      Conserved regions 4.1 and 4.2 of sigma(70) constitute the recognition sites for the anti-sigma factor AsiA, and AsiA is a dimer free in solution

      JOURNAL OF BIOLOGICAL CHEMISTRY
    39. Johnson, AA; Johnson, KA
      Exonuclease proofreading by human mitochondrial DNA polymerase

      JOURNAL OF BIOLOGICAL CHEMISTRY
    40. Xu, Y; Potapova, O; Leschziner, AE; Grindley, NDF; Joyce, CM
      Contacts between the 5 ' nuclease of DNA polymerase I and its DNA substrate

      JOURNAL OF BIOLOGICAL CHEMISTRY
    41. Ishmael, FT; Alley, SC; Benkovic, SJ
      Identification and mapping of protein-protein interactions between gp32 and gp59 by cross-linking

      JOURNAL OF BIOLOGICAL CHEMISTRY
    42. Khare, V; Eckert, KA
      The 3 '-> 5 ' exonuclease of T4 DNA polymerase removes premutagenic alkyl mispairs and contributes to futile cycling at O-6-methylguanine lesions

      JOURNAL OF BIOLOGICAL CHEMISTRY
    43. Orsini, G; Kolb, A; Buc, H
      The Escherichia coli RNA polymerase center dot anti-sigma(70) AsiA complexutilizes alpha-carboxyl-terminal domain upstream promoter contacts to transcribe from a-10/-35 promoter

      JOURNAL OF BIOLOGICAL CHEMISTRY
    44. Lebars, I; Hu, RM; Lallemand, JY; Uzan, M; Bontems, F
      Role of the substrate conformation and of the S1 protein in the cleavage efficiency of the T4 endoribonuclease RegB

      JOURNAL OF BIOLOGICAL CHEMISTRY
    45. Cherepanov, A; Yildirim, E; de Vries, S
      Joining of short DNA oligonucleotides with base pair mismatches by T4 DNA ligase

      JOURNAL OF BIOCHEMISTRY
    46. Dove, SL; Hochschild, A
      Bacterial two-hybrid analysis of interactions between region 4 of the sigma(70) subunit of RNA polymerase and the transcriptional regulators Rsd fromEscherichia coli and AlgQ from Pseudomonas aeruginosa

      JOURNAL OF BACTERIOLOGY
    47. Klein, G; Georgopoulos, C
      Identification of important amino acid residues that modulate binding of Escherichia coli GroEL to its various cochaperones

      GENETICS
    48. Hadjimarcou, MI; Kokoska, RJ; Petes, TD; Reha-Krantz, LJ
      Identification of a mutant DNA polymerase delta in Saccharomyces cerevisiae with an antimutator phenotype for frameshift mutations

      GENETICS
    49. Corbin, BD; McLean, RJC; Aron, GM
      Bacteriophage T4 multiplication in a glucose-limited Escherichia coli biofilm

      CANADIAN JOURNAL OF MICROBIOLOGY
    50. Shneider, MM; Boudko, SP; Lustig, A; Mesyanzhinov, VV
      Properties of bacteriophage T4 baseplate protein encoded by gene 8

      BIOCHEMISTRY-MOSCOW
    51. Kurochkina, LP; Leiman, PG; Venyaminov, SY; Mesyanzhinov, VV
      Expression and properties of bacteriophage T4 gene product 11

      BIOCHEMISTRY-MOSCOW
    52. Holder, JB; Bennett, AF; Chen, JM; Spencer, DS; Byrne, MP; Stites, WE
      Energetics of side chain packing in staphylococcal nuclease assessed by exchange of valines, isoleucines, and leucines

      BIOCHEMISTRY
    53. Chen, JM; Stites, WE
      Energetics of side chain packing in staphylococcal nuclease assessed by systematic double mutant cycles

      BIOCHEMISTRY
    54. Chen, JM; Stites, WE
      Higher-order packing interactions in triple and quadruple mutants of staphylococcal nuclease

      BIOCHEMISTRY
    55. Lin, TC; Wang, CX; Joyce, CM; Konigsberg, WH
      3 '-5 ' exonucleolytic activity of DNA polymerases: Structural features that allow kinetic discrimination between ribo- and deoxyribonucleotide residues

      BIOCHEMISTRY
    56. Tuckerman, ME; Martyna, GJ
      Understanding modern molecular dynamics: Techniques and applications

      JOURNAL OF PHYSICAL CHEMISTRY B
    57. Genschel, J; Curth, U; Urbanke, C
      Interaction of E-coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease

      BIOLOGICAL CHEMISTRY
    58. Burda, MR; Hindennach, I; Miller, S
      Stability of bacteriophage T4 short tail fiber

      BIOLOGICAL CHEMISTRY
    59. Asami, K; Tanji, Y; Unno, H
      Characterization of oxygen-dependent lysis of Escherichia coli cells infected by bacteriophage T4

      JOURNAL OF BIOSCIENCE AND BIOENGINEERING
    60. Bota, A; Gella, FJ; Canalias, F
      Purification of human adenosine deaminase for the preparation of a reference material

      JOURNAL OF CHROMATOGRAPHY B
    61. Sommer, N; Salniene, V; Gineikiene, E; Nivinskas, R; Ruger, W
      T4 early promoter strength probed in vivo with unribosylated and ADP-ribosylated Escherichia coli RNA polymerase: a mutation analysis

      MICROBIOLOGY-UK
    62. Kreuzer, KN
      Recombination-dependent DNA replication in phage T4

      TRENDS IN BIOCHEMICAL SCIENCES
    63. Word, JM; Bateman, RC; Presley, BK; Lovell, SC; Richardson, DC
      Exploring steric constraints on protein mutations using MAGE/PROBE

      PROTEIN SCIENCE
    64. Becker, G; Klauck, E; Hengge-Aronis, R
      The response regulator RssB, a recognition factor for sigma(s) proteolysisin Escherichia coli, can act like an anti-sigma(s) factor

      MOLECULAR MICROBIOLOGY
    65. Pavlov, AR; Karam, JD
      Nucleotide-sequence-specific and non-specific interactions of T4 DNA polymerase with its own mRNA

      NUCLEIC ACIDS RESEARCH
    66. Kim, JY; Park, IK
      The flavin coenzymes: a new class of group I intron inhibitors

      BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
    67. Cao, J; Sun, YQ; Berglindh, T; Mellgard, B; Li, ZQ; Mardh, B; Mardh, S
      Helicobacter pylori-antigen-binding fragments expressed on the filamentousM13 phage prevent bacterial growth

      BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
    68. Muthusamy, R; Gromiha, MM; Ponnuswamy, PK
      On the thermal unfolding character of globular proteins

      JOURNAL OF PROTEIN CHEMISTRY
    69. Wray, JW; Abaase, WA; Ostheimer, GJ; Zhang, XJ; Matthews, BW
      Use of a non-rigid region in T4 lysozyme to design an adaptable metal-binding site

      PROTEIN ENGINEERING
    70. Backert, S; Borner, T
      Phage T4-like intermediates of DNA replication and recombination in the mitochondria of the higher plant Chenopodium album (L.)

      CURRENT GENETICS
    71. Park, IK; Sung, JS
      K+ and Mg2+ ions promote the self-splicing of the td intron RNA inhibited by spectinomycin

      BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION
    72. Mullaney, JM; Thompson, RB; Gryczynski, Z; Black, LW
      Green fluorescent protein as a probe of rotational mobility within bacteriophage T4

      JOURNAL OF VIROLOGICAL METHODS
    73. Hosaka, H; Hosono, K; Kawai, G; Takai, K; Takaku, H
      Self-cleavage of p2Sp1 RNA with Mg2+ and non-ionic detergent (Brij 58)

      JOURNAL OF INORGANIC BIOCHEMISTRY
    74. Bernard, MA; Ray, NB; Olcott, MC; Hendricks, SP; Mathews, CK
      Metabolic functions of microbial nucleoside diphosphate kinases

      JOURNAL OF BIOENERGETICS AND BIOMEMBRANES
    75. Lata, R; Conway, JF; Cheng, NQ; Duda, RL; Hendrix, RW; Wikoff, WR; Johnson, JE; Tsuruta, H; Steven, AC
      Maturation dynamics of a viral capsid: Visualization of transitional intermediate states

      CELL
    76. Herr, AJ; Atkins, JF; Gesteland, RF
      Coupling of open reading frames by translational bypassing

      ANNUAL REVIEW OF BIOCHEMISTRY
    77. Cox, MM; Goodman, MF; Kreuzer, KN; Sherratt, DJ; Sandler, SJ; Marians, KJ
      The importance of repairing stalled replication forks

      NATURE
    78. Kochkina, ZM; Surgucheva, NA; Chirkov, SN
      Inactivation of coliphages by chitosan derivatives

      MICROBIOLOGY
    79. Newcomb, WW; Trus, BL; Cheng, NQ; Steven, AC; Sheaffer, AK; Tenney, DJ; Weller, SK; Brown, JC
      Isolation of herpes simplex virus procapsids from cells infected with a protease-deficient mutant virus

      JOURNAL OF VIROLOGY
    80. Kunisawa, T
      Functional role of mycobacteriophage transfer RNAs

      JOURNAL OF THEORETICAL BIOLOGY
    81. Quillin, ML; Breyer, WA; Griswold, IJ; Matthews, BW
      Size versus polarizability in protein-ligand interactions: Binding of noble gases within engineered cavities in phage T4 lysozyme

      JOURNAL OF MOLECULAR BIOLOGY
    82. Sridevi, K; Juneja, J; Bhuyan, AK; Krishnamoorthy, G; Udgaonkar, JB
      The slow folding reaction of barstar: The core tryptophan region attains tight packing before substantial secondary and tertiary structure formation and final compaction of the polypeptide chain

      JOURNAL OF MOLECULAR BIOLOGY
    83. Reddy, YVR; Rao, DN
      Binding of EcoP15I DNA methyltransferase to DNA reveals a large structuraldistortion within the recognition sequence

      JOURNAL OF MOLECULAR BIOLOGY
    84. Ferguson, PL; Coombs, DH
      Pulse-chase analysis of the in vivo assembly of the bacteriophage T4 tail

      JOURNAL OF MOLECULAR BIOLOGY
    85. Garvish, JF; Lloyd, RS
      Active-site determination of a pyrimidine dimer glycosylase

      JOURNAL OF MOLECULAR BIOLOGY
    86. Liu, RJ; Baase, WA; Matthews, BW
      The introduction of strain and its effects on the structure and stability of T4 lysozyme

      JOURNAL OF MOLECULAR BIOLOGY
    87. Villemain, JL; Ma, YJ; Giedroc, DP; Morrical, SW
      Mutations in the N-terminal cooperativity domain of gene 32 protein alter properties of the T4 DNA replication and recombination systems

      JOURNAL OF BIOLOGICAL CHEMISTRY
    88. Nyaga, SG; Lloyd, RS
      Two glycosylase/abasic lyases from Neisseria mucosa that initiate DNA repair at sites of UV-induced photoproducts

      JOURNAL OF BIOLOGICAL CHEMISTRY
    89. Xu, Y; Grindley, NDF; Joyce, CM
      Coordination between the polymerase and 5 '-nuclease components of DNA polymerase I of Escherichia coli

      JOURNAL OF BIOLOGICAL CHEMISTRY
    90. Song, BW; Sung, P
      Functional interactions among yeast Rad51 recombinase, Rad52 mediator, andreplication protein A in DNA strand exchange

      JOURNAL OF BIOLOGICAL CHEMISTRY
    91. Kahler, M; Antranikian, G
      Cloning and characterization of a family B DNA polymerase from the hyperthermophilic crenarchaeon Pyrobaculum islandicum

      JOURNAL OF BACTERIOLOGY
    92. Suvajittanont, W; McGuire, J; Bothwell, MK
      Adsorption of Thermomonospora fusca E-5 cellulase on silanized silica

      BIOTECHNOLOGY AND BIOENGINEERING
    93. Lee, J; Lee, K; Shin, S
      Theoretical studies of the response of a protein structure to cavity-creating mutations

      BIOPHYSICAL JOURNAL
    94. Zhemaeva, LV; Sykilinda, NN; Navruzbekov, GA; Kurochkina, LP; Mesyanzhinov, VV
      Structure and folding of bacteriophage T4 gene product 9 triggering infection. II. Study of conformational changes of gene product 9 mutants using monoclonal antibodies

      BIOCHEMISTRY-MOSCOW
    95. Miroshnikov, KA; Sernova, NV; Shneider, MM; Mesyanzhinov, VV
      Transformation of a fragment of beta-structural bacteriophage T4 adhesin to stable alpha-helical trimer

      BIOCHEMISTRY-MOSCOW
    96. Capen, CM; Teschke, CM
      Folding defects caused by single amino acid substitutions in a subunit arenot alleviated by assembly

      BIOCHEMISTRY
    97. Funahashi, J; Takano, K; Yamagata, Y; Yutani, K
      Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions

      BIOCHEMISTRY
    98. Mulder, FAA; Hon, B; Muhandiram, DR; Dahlquist, FW; Kay, LE
      Flexibility and ligand exchange in a buried cavity mutant of T4 lysozyme studied by multinuclear NMR

      BIOCHEMISTRY
    99. Mejlhede, N; Neuhard, J
      The role of zinc in Bacillus subtilis cytidine deaminase

      BIOCHEMISTRY
    100. Lacourciere, KA; Stivers, JT; Marino, JP
      Mechanism of neomycin and Rev peptide binding to the Rev responsive element of HIV-1 as determined by fluorescence and NMR spectroscopy

      BIOCHEMISTRY


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Documento generato il 22/10/20 alle ore 21:40:15