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    1. DiFronzo, NL; Leung, CT; Mammel, MK; Georgopoulos, K; Taylor, BJ; Pham, QN
      Ikaros, a lymphoid-cell-specific transcription factor, contributes to the leukemogenic phenotype of a mink cell focus-inducing murine leukemia virus

      JOURNAL OF VIROLOGY
    2. Li, YZ; Chen, ZY; Wang, WR; Baker, CC; Krug, RM
      The 3 '-end-processing factor CPSF is required for the splicing of single-intron pre-mRNAs in vivo

      RNA-A PUBLICATION OF THE RNA SOCIETY
    3. Hilleren, P; Parker, R
      Defects in the mRNA export factors Rat7p, Gle1p, Mex67p, and Rat8p cause hyperadenylation during 3 '-end formation of nascent transcripts

      RNA-A PUBLICATION OF THE RNA SOCIETY
    4. Liu, YM; Huang, T; MacMorris, M; Blumenthal, T
      Interplay between AAUAAA and the trans-splice site in processing of a Caenorhabditis elegans operon pre-mRNA

      RNA-A PUBLICATION OF THE RNA SOCIETY
    5. Battle, DJ; Doudna, JA
      The stem-loop binding protein forms a highly stable and specific complex with the 3 ' stem-loop of histone mRNAs

      RNA-A PUBLICATION OF THE RNA SOCIETY
    6. Guo, L; Allen, EM; Miller, WA
      Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA

      MOLECULAR CELL
    7. Khlimankov, DY; Petruseva, IO; Rechkunova, NI; Belousova, EA; Kolpashchikov, DM; Khodyreva, SN; Lavrik, OI
      Preparation of photoreactive oligonucleotide duplexes and their application to photoaffinity modification of DNA-binding proteins

      RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY
    8. Lee, YJ; Kim, H; Chung, JH; Lee, Y
      Testis-specific expression of an intronless gene encoding a human poly(A) polymerase

      MOLECULES AND CELLS
    9. Culver, GM
      Meanderings of the mRNA through the ribosome

      STRUCTURE
    10. Kolpashchikov, DM; Hughes, P; Favre, A; Baldacci, G; Lavrik, OI
      Localization of the large subunit of replication factor C near the 5 ' endof DNA primers

      JOURNAL OF MOLECULAR RECOGNITION
    11. Schreiber, M; Vahrenhorst, R; Buss, V; Fulscher, NP
      Ab initio (CASPT2) excited state calculations, including circular dichroism, of helically twisted cyanine dyes

      CHIRALITY
    12. Sullivan, E; Santiago, C; Parker, ED; Dominski, Z; Yang, XC; Lanzotti, DJ; Ingledue, TC; Marzluff, WF; Duronio, RJ
      Drosophila stem loop binding protein coordinates accumulation of mature histone mRNA with cell cycle progression

      GENES & DEVELOPMENT
    13. Evans, D; Perez, I; MacMorris, M; Leake, D; Wilusz, CJ; Blumenthal, T
      A complex containing CstF-64 and the SL2 snRNP connects mRNA 3 ' end formation and trans-splicing in C-elegans operons

      GENES & DEVELOPMENT
    14. Freire-Picos, MA; Lombardia-Ferreira, LJ; Ramil, E; Gonzalez-Dominguez, M; Cerdan, ME
      The KICYC1 gene, a downstream region for two differentially regulated transcripts

      YEAST
    15. Schlosser, A; Nawrot, B; Grillenbeck, N; Sprinzl, M
      Fluorescence-monitored conformational change on the 3 '-end of tRNA upon aminoacylation

      JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
    16. Sabaj, V; Aslund, L; Pettersson, U; Galanti, N
      Histone gene expression during the cell cycle in Trypanosoma cruzi

      JOURNAL OF CELLULAR BIOCHEMISTRY
    17. Peculis, BA; DeGregorio, S; McDowell, K
      The U8 snoRNA gene family: identification and characterization of distinct, functional U8 genes in Xenopus

      GENE
    18. Chao, SH; Greenleaf, AL; Price, DH
      Juglone, an inhibitor of the peptidyl-prolyl isomerase Pin1, also directlyblocks transcription

      NUCLEIC ACIDS RESEARCH
    19. Kolpashchikov, DM; Khodyreva, SN; Khlimankov, DY; Wold, MS; Favre, A; Lavrik, OI
      Polarity of human replication protein A binding to DNA

      NUCLEIC ACIDS RESEARCH
    20. Gao, X; Ruan, KC; Liu, WY
      Exploration of RNA 3 ' terminal locations in rat ribosome

      MOLECULAR AND CELLULAR BIOCHEMISTRY
    21. Dominski, Z; Erkmann, JA; Greenland, JA; Marzluff, WF
      Mutations in the RNA binding domain of stem-loop binding protein define separable requirements for RNA binding and for histone pre-mRNA processing

      MOLECULAR AND CELLULAR BIOLOGY
    22. Helming, S; Zhelkovsky, A; Moore, CL
      Fip1 regulates the activity of poly(A) polymerase through multiple interactions

      MOLECULAR AND CELLULAR BIOLOGY
    23. Vo, LTA; Minet, M; Schmitter, JM; Lacroute, F; Wyers, F
      Mpe1, a zinc knuckle protein, is an essential component of yeast cleavage and polyadenylation factor required for the cleavage and polyadenylation ofmRNA

      MOLECULAR AND CELLULAR BIOLOGY
    24. Neu-Yilik, G; Gehring, N; Thermann, R; Frede, U; Hentze, MW; Kulozik, AE
      Splicing and 3 ' end formation in the definition of nonsense-mediated decay-competent human beta-globin mRNPs

      EMBO JOURNAL
    25. Dichtl, B; Keller, W
      Recognition of polyadenylation sites in yeast pre-mRNAs by cleavage and polyadenylation factor

      EMBO JOURNAL
    26. Nagy, PD; Pogany, J; Simon, AE
      In vivo and in vitro characterization of an RNA replication enhancer in a satellite RNA associated with Turnip crinkle virus

      VIROLOGY
    27. Chen, D; Barros, M; Spencer, E; Patton, JT
      Features of the 3'-consensus sequence of rotavirus mRNAs critical to minusstrand synthesis

      VIROLOGY
    28. Asseline, U; Cheng, E
      Synthesis and binding properties of perylene-oligo-2 '-deoxyribonucleotideconjugates

      TETRAHEDRON LETTERS
    29. Sengupta, J; Agrawal, RK; Frank, J
      Visualization of protein S1 within the 30S ribosomal subunit and its interaction with messenger RNA

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    30. Barilla, D; Lee, BA; Proudfoot, NJ
      Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    31. Gross, S; Moore, C
      Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    32. Khlimankov, DY; Rechkunova, NI; Kolpashchikov, DM; Petruseva, IO; Khodyreva, SN; Favre, A; Lavrik, OI
      Interaction of human replication protein A with DNA duplexes containing gaps of varying size

      MOLECULAR BIOLOGY
    33. Rothnie, HM; Chen, G; Futterer, J; Hohn, T
      Polyadenylation in rice tungro bacilliform virus: cis-acting signals and regulation

      JOURNAL OF VIROLOGY
    34. Dang, Q; Hu, WS
      Effect of homology length in the repeat region on minus-strand DNA transfer and retroviral replication

      JOURNAL OF VIROLOGY
    35. Ranjith-Kumar, CT; Gajewski, J; Gutshall, L; Maley, D; Sarisky, RT; Kao, CC
      Terminal nucleotidyl transferase activity of recombinant Flaviviridae RNA-dependent RNA polymerases: Implication for viral RNA synthesis

      JOURNAL OF VIROLOGY
    36. Huang, PY; Lai, MMC
      Heterogeneous nuclear ribonucleoprotein A1 binds to the 3 '-untranslated region and mediates potential 5 '-3 '-end cross talks of mouse hepatitis virus RNA

      JOURNAL OF VIROLOGY
    37. Ismail, SI; Rohll, JB; Kingsman, SM; Kingsman, AJ; Uden, M
      Use of intron-disrupted polyadenylation sites to enhance expression and safety of retroviral vectors

      JOURNAL OF VIROLOGY
    38. Huang, HK; Forsburg, SL; John, UP; O'Connell, MJ; Hunter, T
      Isolation and characterization of the Pin1/Ess1p homologue in Schizosaccharomyces pombe

      JOURNAL OF CELL SCIENCE
    39. Frey, MR; Matera, AG
      RNA-mediated interaction of Cajal bodies and U2 snRNA genes

      JOURNAL OF CELL BIOLOGY
    40. Ahuja, D; Karow, DS; Kilpatrick, JE; Imperiale, MJ
      RNA polymerase II-dependent positional effects on mRNA 3 ' end processing in the adenovirus major late transcription unit

      JOURNAL OF BIOLOGICAL CHEMISTRY
    41. McNamara-Schroeder, KJ; Hennessey, RF; Harding, GA; Jensen, RC; Stumph, WE
      The Drosophila U1 and U6 gene proximal sequence elements act as important determinants of the RNA polymerase specificity of small nuclear RNA gene promoters in vitro and in vivo

      JOURNAL OF BIOLOGICAL CHEMISTRY
    42. Aphasizhev, R; Simpson, L
      Isolation and characterization of a U-specific 3 '-5 '-exonuclease from mitochondria of Leishmania tarentolae

      JOURNAL OF BIOLOGICAL CHEMISTRY
    43. Lian, Z; Wang, L; Yamaga, S; Bonds, W; Beazer-Barclay, Y; Kluger, Y; Gerstein, M; Newburger, PE; Berliner, N; Weissman, SM
      Genomic and proteomic analysis of the myeloid differentiation program

      BLOOD
    44. Subrahmanyam, YVBK; Yamaga, S; Prashar, Y; Lee, HH; Hoe, NP; Kluger, Y; Gerstein, M; Goguen, JD; Newburger, PE; Weissman, SM
      RNA expression patterns change dramatically in human neutrophils exposed to bacteria

      BLOOD
    45. Myers, JK; Morris, DP; Greenleaf, AL; Oas, TG
      Phosphorylation of RNA polymerase IICTD fragments results in tight bindingto the WW domain from the yeast prolyl isomerase Ess1

      BIOCHEMISTRY
    46. Tardif, KD; Liu, MS; Vitseva, O; Hou, YM; Horowitz, J
      Misacylation and editing by Escherichia coli Valyl-tRNA synthetase: Evidence for two tRNA binding sites

      BIOCHEMISTRY
    47. Fujimori, F; Gunji, W; Kikuchi, J; Mogi, T; Ohashi, Y; Makino, T; Oyama, A; Okuhara, K; Uchida, T; Murakami, Y
      Crosstalk of prolyl isomerases, Pin1/Ess1, and cyclophilin A

      BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
    48. Lee, YJ; Ahn, JK; Chung, JH
      Expression of murine poly(A) binding protein II gene in testis

      IUBMB LIFE
    49. Chizhikov, V; Patton, JT
      A four-nucleotide translation enhancer in the 3 '-terminal consensus sequence of the nonpolyadenylated mRNAs of rotavirus

      RNA-A PUBLICATION OF THE RNA SOCIETY
    50. Veraldi, KL; Edwalds-Gilbert, G; MacDonald, CC; Wallace, AM; Milcarek, C
      Isolation and characterization of polyadenylation complexes assembled in vitro

      RNA-A PUBLICATION OF THE RNA SOCIETY
    51. Brodsky, AS; Silver, PA
      Pre-mRNA processing factors are required for nuclear export

      RNA-A PUBLICATION OF THE RNA SOCIETY
    52. Juge, F; Audibert, A; Benoit, B; Simonelig, M
      Tissue-specific autoregulation of Drosophila suppressor of forked by alternative poly(A) site utilization leads to accumulation of the suppressor of forked protein in mitotically active cells

      RNA-A PUBLICATION OF THE RNA SOCIETY
    53. Michel, F; Schumperli, D; Muller, B
      Specificities of Caenorhabditis elegans and human hairpin binding proteinsfor the first nucleotide in the histone mRNA hairpin loop

      RNA-A PUBLICATION OF THE RNA SOCIETY
    54. Lorkovic, ZJ; Kirk, DAW; Klahre, U; Hemmings-Mieszczak, M; Filipowicz, W
      RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)(+) RNA in nuclei of plant cells

      RNA-A PUBLICATION OF THE RNA SOCIETY
    55. Ingledue, TC; Dominski, Z; Sanchez, R; Erkmann, JA; Marzluff, WF
      Dual role for the RNA-binding domain of Xenopus laevis SLBP1 in histone pre-mRNA processing

      RNA-A PUBLICATION OF THE RNA SOCIETY
    56. Sun, XL; Maquat, LE
      mRNA surveillance in mammalian cells: The relationship between introns andtranslation termination

      RNA-A PUBLICATION OF THE RNA SOCIETY
    57. Muller, M; Lucchini, R; Sogo, JM
      Replication of yeast rDNA initiates downstream of transcriptionally activegenes

      MOLECULAR CELL
    58. Verdecia, MA; Bowman, ME; Lu, KP; Hunter, T; Noel, JP
      Structural basis for phosphoserine-proline recognition by group IVWW domains

      NATURE STRUCTURAL BIOLOGY
    59. Shatkin, AJ; Manley, JL
      The ends of the affair: Capping and polyadenylation

      NATURE STRUCTURAL BIOLOGY
    60. Newburger, PE; Subrahmanyam, YVBK; Weissman, SM
      Global analysis of neutrophil gene expression

      CURRENT OPINION IN HEMATOLOGY
    61. Koizumi, M; Akahori, K; Ohmine, T; Tsutsumi, S; Sone, J; Kosaka, T; Kaneko, M; Kimura, S; Shimada, K
      Biologically active oligodeoxyribonucleotides. Part 12: N-2-methylation of2 '-deoxyguanosines enhances stability of parallel G-quadruplex and anti-HIV-1 activity

      BIOORGANIC & MEDICINAL CHEMISTRY LETTERS
    62. Komarnitsky, P; Cho, EJ; Buratowski, S
      Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

      GENES & DEVELOPMENT
    63. Rothstein, R; Michel, B; Gangloff, S
      Replication fork pausing and recombination or "gimme a break"

      GENES & DEVELOPMENT
    64. Grec, S; Wang, YC; Le Guen, L; Negrouk, V; Boutry, M
      Cryptic polyadenylation sites within the coding sequence of three yeast genes expressed in tobacco

      GENE
    65. Martin, F; Michel, F; Zenklusen, D; Muller, B; Schumperli, D
      Positive and negative mutant selection in the human histone hairpin-binding protein using the yeast three-hybrid system

      NUCLEIC ACIDS RESEARCH
    66. Yehudai-Resheff, S; Schuster, G
      Characterization of the E.coli poly(A) polymerase: nucleotide specificity,RNA-binding affinities and RNA structure dependence

      NUCLEIC ACIDS RESEARCH
    67. van Helden, J; del Olmo, M; Perez-Ortin, JE
      Statistical analysis of yeast genomic downstream sequences reveals putative polyadenylation signals

      NUCLEIC ACIDS RESEARCH
    68. Hoopes, BC; Bowers, GD; DiVisconte, MJ
      The two Saccharomyces cerevisiae SUA7 (TFIIB) transcripts differ at the 3 '-end and respond differently to stress

      NUCLEIC ACIDS RESEARCH
    69. Hatton, LS; Eloranta, JJ; Figueiredo, LM; Takagaki, Y; Manley, JL; O'Hare, K
      The Drosophila homologue of the 64 kDa subunit of cleavage stimulation factor interacts with the 77 kDa subunit encoded by the suppressor of forked gene

      NUCLEIC ACIDS RESEARCH
    70. Sinha, K; Reddy, R
      Identification of a similar to 30S size non-ribosomal Saccharomyces cerevisiae RNA that is rapidly labeled on its 3 ' end by ATP or UTP

      MOLECULAR BIOLOGY REPORTS
    71. Alvelo-Ceron, D; Niu, LM; Collart, DG
      Growth regulation of human variant histone genes and acetylation of the encoded proteins

      MOLECULAR BIOLOGY REPORTS
    72. Perumal, K; Gu, J; Reddy, R
      Evolutionary conservation of post-transcriptional 3 ' end adenylation of small RNAs: S-cerevisiae signal recognition particle RNA and U2 small nuclear RNA are post-transcriptionally adenylated

      MOLECULAR AND CELLULAR BIOCHEMISTRY
    73. Hountondji, C; Beauvallet, C; Pernollet, JC; Blanquet, S
      Enzyme-induced covalent modification of methionyl-tRNA synthetase from Bacillus stearothermophilus by methionyl-adenylate: Identification of the labeled amino acid residues by matrix-assisted laser desorption-ionization massspectrometry

      JOURNAL OF PROTEIN CHEMISTRY
    74. Brackenridge, S; Proudfoot, NJ
      Recruitment of a basal polyadenylation factor by the upstream sequence element of the human lamin B2 polyadenylation signal

      MOLECULAR AND CELLULAR BIOLOGY
    75. Mizrahi, N; Moore, C
      Posttranslational phosphorylation and ubiquitination of the Saccharomyces cerevisiae poly(A) polymerase at the S/G(2) stage of the cell cycle

      MOLECULAR AND CELLULAR BIOLOGY
    76. Das, B; Guo, ZJ; Russo, P; Chartrand, P; Sherman, F
      The role of nuclear cap binding protein Cbc1p of yeast in mRNA terminationand degradation

      MOLECULAR AND CELLULAR BIOLOGY
    77. Hans, H; Alwine, JC
      Functionally significant secondary structure of the simian virus 40 late polyadenylation signal

      MOLECULAR AND CELLULAR BIOLOGY
    78. Takagaki, Y; Manley, JL
      Complex protein interactions within the human polyadenylation machinery identify a novel component

      MOLECULAR AND CELLULAR BIOLOGY
    79. Van Hoof, A; Lennertz, P; Parker, R
      Yeast exosome mutants accumulate 3 '-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

      MOLECULAR AND CELLULAR BIOLOGY
    80. Burkard, KTD; Butler, JS
      A nuclear 3 '-5 ' exonuclease involved in mRNA degradation interacts with poly(A) polymerase and the hnRNA protein Npl3p

      MOLECULAR AND CELLULAR BIOLOGY
    81. Whitfield, ML; Zheng, LX; Baldwin, A; Ohta, T; Hurt, MM; Marzluff, WF
      Stem-loop binding protein, the protein that binds the 3 ' end of histone mRNA, is cell cycle regulated by both translational and posttranslational mechanisms

      MOLECULAR AND CELLULAR BIOLOGY
    82. Bellini, M
      Coilin, more than a molecular marker of the Cajal (coiled) body

      BIOESSAYS
    83. Lambermon, MHL; Simpson, GG; Kirk, DAW; Hemmings-Mieszczak, M; Klahre, U; Filipowicz, W
      UBP1, a novel hnRNP-like protein that functions at multiple steps of higher plant nuclear pre-mRNA maturation

      EMBO JOURNAL
    84. van Hoof, A; Lennertz, P; Parker, R
      Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAsin yeast

      EMBO JOURNAL
    85. Fatica, A; Morlando, M; Bozzoni, I
      Yeast snoRNA accumulation relies on a cleavege-dependent/polyadenylation-independent 3 '-processing apparatus

      EMBO JOURNAL
    86. de Vries, H; Ruegsegger, U; Hubner, W; Friedlein, A; Langen, H; Keller, W
      Human pre-mRNA cleavage factor IIm contains homologs of yeast proteins andbridges two other cleavage factors

      EMBO JOURNAL
    87. Martin, G; Keller, W; Doublie, S
      Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP

      EMBO JOURNAL
    88. Wu, XY; Wilcox, CB; Devasahayam, G; Hackett, RL; Arevalo-Rodriguez, M; Cardenas, ME; Heitman, J; Hanes, SD
      The Ess1 prolyl isomerase is linked to chromatin remodeling complexes and the general transcription machinery

      EMBO JOURNAL
    89. Arevalo-Rodriguez, M; Cardenas, ME; Wu, XY; Hanes, SD; Heitman, J
      Cyclophilin A and Ess1 interact with and regulate silencing by the Sin3-Rpd3 histone deacetylase

      EMBO JOURNAL
    90. Yonaha, M; Proudfoot, NJ
      Transcriptional termination and coupled polyadenylation in vitro

      EMBO JOURNAL
    91. Barabino, SML; Ohnacker, M; Keller, M
      Distinct roles of two Yth1p domains in 3 '-end cleavage and polyadenylation of yeast pre-mRNAs

      EMBO JOURNAL
    92. Ohnacker, M; Barabino, SML; Preker, PJ; Keller, W
      The WD-repeat protein Pfs2p bridges two essential factors within the yeastpre-mRNA 3 '-end-processing complex

      EMBO JOURNAL
    93. Fang, JWS; Moyer, RW
      The effects of the conserved extreme 3 ' end sequence of hepatitis C virus(HCV) RNA on the in vitro stabilization and translation of the HCV RNA genome

      JOURNAL OF HEPATOLOGY
    94. Regnier, V; Tahiri, A; Andre, N; Lemaitre, M; Le Doan, T; Preat, V
      Electroporation-mediated delivery of 3 '-protected phosphodiester oligodeoxynucleotides to the skin

      JOURNAL OF CONTROLLED RELEASE
    95. Zhang, XM; Liu, RZ
      Identification of a noncanonical signal for transcription of a novel subgenomic mRNA of mouse hepatitis virus: Implication for the mechanism of coronavirus RNA transcription

      VIROLOGY
    96. Nagy, PD; Pogany, J
      Partial purification and characterization of Cucumber necrosis virus and Tomato bushy stunt virus RNA-dependent RNA polymerases: Similarities and differences in template usage between tombusvirus and carmovirus RNA-dependentRNA polymerases

      VIROLOGY
    97. Guan, HC; Carpenter, CD; Simon, AE
      Analysis of cis-acting sequences involved in plus-strand synthesis of a turnip crinkle virus-associated satellite RNA identifies a new carmovirus replication element

      VIROLOGY
    98. Mohanty, BK; Kushner, SR
      Polynucleotide phosphorylase functions both as a 3 '-> 5 ' exonuclease anda poly(A) polymerase in Escherichia coli

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    99. Greger, IH; Aranda, A; Proudfoot, N
      Balancing transcriptional interference and initiation on the GAL7 promoterof Saccharomyces cerevisiae

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
    100. Feng, YN; Cohen, SN
      Unpaired terminal nucleotides and 5 ' monophosphorylation govern 3 ' polyadenylation by Escherichia coli poly(A) polymerase I

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA


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Documento generato il 03/08/20 alle ore 17:53:46