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Titolo:
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
Autore:
Mayer, K; Schuller, C; Wambutt, R; Murphy, G; Volckaert, G; Pohl, T; Dusterhoft, A; Stiekema, W; Entian, KD; Terryn, N; Harris, B; Ansorge, W; Brandt, P; Grivell, L; Rieger, M; Weichselgartner, M; de Simone, V; Obermaier, B; Mache, R; Muller, M; Kreis, M; Delseny, M; Puigdomenech, P; Watson, M; Schmidtheini, T; Reichert, B; Portatelle, D; Perez-Alonso, M; Boutry, M; Bancroft, I; Vos, P; Hoheisel, J; Zimmermann, W; Wedler, H; Ridley, P; Langham, SA; McCullagh, B; Bilham, L; Robben, J; Van der Schueren, J; Grymonprez, B; Chuang, YJ; Vandenbussche, F; Braeken, M; Weltjens, I; Voet, M; Bastiaens, I; Aert, R; Defoor, E; Weitzenegger, T; Bothe, G; Ramsperger, U; Hilbert, H; Braun, M; Holzer, E; Brandt, A; Peters, S; van Staveren, M; Dirkse, W; Mooijman, P; Lankhorst, RK; Rose, M; Hauf, J; Kotter, P; Berneiser, S; Hempel, S; Feldpausch, M; Lamberth, S; Van den Daele, H; De Keyser, A; Buysshaert, C; Gielen, J; Villarroel, R; De Clercq, R; Van Montagu, M; Rogers, J; Cronin, A; Quail, M; Bray-Allen, S; Clark, L; Doggett, J; Hall, S; Kay, M; Lennard, N; McLay, K; Mayes, R; Pettett, A; Rajandream, MA; Lyne, M; Benes, V; Rechmann, S; Borkova, D; Blocker, H; Scharfe, M; Grimm, M; Lohnert, TH; Dose, S; de Haan, M; Maarse, A; Schafer, M; Muller-Auer, S; Gabel, C; Fuchs, M; Fartmann, B; Granderath, K; Dauner, D; Herzl, A; Neumann, S; Argiriou, A; Vitale, D; Liguori, R; Piravandi, E; Massenet, O; Quigley, F; Clabauld, G; Mundlein, A; Felber, R; Schnabl, S; Hiller, R; Schmidt, W; Lecharny, A; Aubourg, S; Chefdor, F; Cooke, R; Berger, C; Montfort, A; Casacuberta, E; Gibbons, T; Weber, N; Vandenbol, M; Bargues, M; Terol, J; Torres, A; Perez-Perez, A; Purnelle, B; Bent, E; Johnson, S; Tacon, D; Jesse, T; Heijnen, L; Schwarz, S; Scholler, P; Heber, S; Francs, P; Bielke, C; Frishman, D; Haase, D; Lemcke, K; Mewes, HW; Stocker, S; Zaccaria, P; Bevan, M; Wilson, RK; de la Bastide, M; Habermann, K; Parnell, L; Dedhia, N; Gnoj, L; Schutz, K; Huang, E; Spiegel, L; Sehkon, M; Murray, J; Sheet, P; Cordes, M; Abu-Threideh, J; Stoneking, T; Kalicki, J; Graves, T; Harmon, G; Edwards, J; Latreille, P; Courtney, L; Cloud, J; Abbott, A; Scott, K; Johnson, D; Minx, P; Bentley, D; Fulton, B; Miller, N; Greco, T; Kemp, K; Kramer, J; Fulton, L; Mardis, E; Dante, M; Pepin, K; Hillier, L; Nelson, J; Spieth, J; Ryan, E; Andrews, S; Geisel, C; Layman, D; Du, H; Ali, J; Berghoff, A; Jones, K; Drone, K; Cotton, M; Joshu, C; Antonoiu, B; Zidanic, M; Strong, C; Sun, H; Lamar, B; Yordan, C; Ma, P; Zhong, J; Preston, R; Vil, D; Shekher, M; Matero, A; Shah, R; Swaby, I;
Indirizzi:
John Innes Ctr Plant Sci Res, Norwich NR4 7UH, Norfolk, England John InnesCtr Plant Sci Res Norwich Norfolk England NR4 7UH olk, England GSF Forschungszentrum Umwelt & Gesundheit, Munich Informat Ctr Prot Sequences, Max Planck Inst Biochem, D-82152 Munich, Germany GSF ForschungszentrumUmwelt & Gesundheit Munich Germany D-82152 Germany AGOWA GmbH, D-12489 Berlin, Germany AGOWA GmbH Berlin Germany D-12489AGOWA GmbH, D-12489 Berlin, Germany Katholieke Univ Leuven, Lab Gene Technol, B-3001 Louvain, Belgium Katholieke Univ Leuven Louvain Belgium B-3001 l, B-3001 Louvain, Belgium GATC GmbH, D-78467 Constance, Germany GATC GmbH Constance Germany D-78467 ATC GmbH, D-78467 Constance, Germany QIAGEN GmbH, D-40724 Hilden, Germany QIAGEN GmbH Hilden Germany D-40724QIAGEN GmbH, D-40724 Hilden, Germany DLO, CPRO, NL-6700 AA Wageningen, Netherlands DLO Wageningen NetherlandsNL-6700 AA NL-6700 AA Wageningen, Netherlands SRD GmbH, D-61440 Oberursel, Germany SRD GmbH Oberursel Germany D-61440SRD GmbH, D-61440 Oberursel, Germany State Univ Ghent, Dept Genet, B-3000 Louvain, Belgium State Univ Ghent Louvain Belgium B-3000 t Genet, B-3000 Louvain, Belgium Wellcome Trust Genome Campus, Hinxton CB10 1SA, Cambs, England Wellcome Trust Genome Campus Hinxton Cambs England CB10 1SA ambs, England European Mol Biol Lab, Biochem Instrumentat Programme, D-69117 Heidelberg,Germany European Mol Biol Lab Heidelberg Germany D-69117 9117 Heidelberg,Germany GBF, D-38124 Braunschweig, Germany GBF Braunschweig Germany D-38124GBF, D-38124 Braunschweig, Germany Univ Amsterdam, Mol Biol Sect, Swammerdam Inst Life Sci, NL-1098 SM Amsterdam, Netherlands Univ Amsterdam Amsterdam Netherlands NL-1098 SM M Amsterdam, Netherlands Genotype GmbH, D-69259 Wilhelmsfeld, Germany Genotype GmbH Wilhelmsfeld Germany D-69259 D-69259 Wilhelmsfeld, Germany MWG AG Biotech, D-85554 Ebersberg, Germany MWG AG Biotech Ebersberg Germany D-85554 ech, D-85554 Ebersberg, Germany Univ Naples Federico II, Dipartimento Biochim & Biotecnol Med, I-80131 Naples, Italy Univ Naples Federico II Naples Italy I-80131 Med, I-80131 Naples, Italy Univ Naples Federico II, CEINGE, I-80131 Naples, Italy Univ Naples Federico II Naples Italy I-80131 INGE, I-80131 Naples, Italy MediGenomix GmbH, DNA Analyt & Genom, D-82152 Planegg Martinsried, GermanyMediGenomix GmbH Planegg Martinsried Germany D-82152 artinsried, Germany Univ Grenoble 1, Lab Plastes & Differenciat Cellulaire, UMR5575, F-38041 Grenoble, France Univ Grenoble 1 Grenoble France F-38041 MR5575, F-38041 Grenoble, France CNRS, F-38041 Grenoble, France CNRS Grenoble France F-38041CNRS, F-38041 Grenoble, France Vienna Bioctr, Inst Microbiol & Genet, A-1030 Vienna, Austria Vienna Bioctr Vienna Austria A-1030 biol & Genet, A-1030 Vienna, Austria Univ Paris Sud, UMR CNRS 8618, Inst Biotechnol Plantes, F-91405 Orsay, France Univ Paris Sud Orsay France F-91405 chnol Plantes, F-91405 Orsay, France Univ Perpignan, UMR CNRS 5545, Lab Physiol & Biol Mol Plantes, F-66860 Perpignan, France Univ Perpignan Perpignan France F-66860 antes, F-66860 Perpignan, France CSIC, Inst Biol Mol Barcelona, Dept Mol Genet, Barcelona, Spain CSIC Barcelona Spain ol Mol Barcelona, Dept Mol Genet, Barcelona, Spain Univ Durham, Dept Biol Sci, Durham DH1 3LE, England Univ Durham Durham England DH1 3LE ept Biol Sci, Durham DH1 3LE, England Microsynth GmbH, CH-9436 Balgach, Switzerland Microsynth GmbH Balgach Switzerland CH-9436 CH-9436 Balgach, Switzerland Baseclear, Leiden, Netherlands Baseclear Leiden NetherlandsBaseclear, Leiden, Netherlands Fac Univ Sci Agronom, Microbiol Unit, B-5030 Gembloux, Belgium Fac Univ Sci Agronom Gembloux Belgium B-5030 t, B-5030 Gembloux, Belgium Univ Valencia, Dept Genet, Valencia 46100, Spain Univ Valencia Valencia Spain 46100 ia, Dept Genet, Valencia 46100, Spain Univ Catholique Louvain, FYSA, B-1348 Louvain, Belgium Univ Catholique Louvain Louvain Belgium B-1348 , B-1348 Louvain, Belgium Keygene NV, NL-6700 AE Wageningen, Netherlands Keygene NV Wageningen Netherlands NL-6700 AE AE Wageningen, Netherlands Deutsch Krebsforschungszentrum, Funct Genome Anal, D-69120 Heidelberg, Germany Deutsch Krebsforschungszentrum Heidelberg Germany D-69120 lberg, Germany Inst Plant Genet & Crop Plant Res IPK, D-06466 Gatersleben, Germany Inst Plant Genet & Crop Plant Res IPK Gatersleben Germany D-06466 ermany Washington Univ, Sch Med, Genome Sequencing Ctr, St Louis, MO 63108 USA Washington Univ St Louis MO USA 63108 uencing Ctr, St Louis, MO 63108 USA Cold Spring Harbor Lab, Lita Annenberg Hazen Genome Ctr, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab Cold Spring Harbor NY USA 11724 rbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor Plant Biol Grp, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab Cold Spring Harbor NY USA 11724 rbor, NY 11724 USA Appl Biosyst Inc, Foster City, CA 94494 USA Appl Biosyst Inc Foster City CA USA 94494 Inc, Foster City, CA 94494 USA
Titolo Testata:
NATURE
fascicolo: 6763, volume: 402, anno: 1999,
pagine: 769 -
SICI:
0028-0836(199912)402:6763<769:SAAOC4>2.0.ZU;2-E
Fonte:
ISI
Lingua:
ENG
Soggetto:
FISSION YEAST; DNA-SEQUENCES; GENOMIC DNA; MODEL-PLANT; REGIONS; RFLP; RNA; RECOMBINATION; PREDICTION; TELOMERE;
Tipo documento:
Article
Natura:
Periodico
Settore Disciplinare:
Agriculture,Biology & Environmental Sciences
Life Sciences
Physical, Chemical & Earth Sciences
Citazioni:
50
Recensione:
Indirizzi per estratti:
Indirizzo: Bevan, M John Innes Ctr Plant Sci Res, Colney Lane, Norwich NR4 7UH, Norfolk, England John Innes Ctr Plant Sci Res Colney Lane Norwich Norfolk England NR4 7UH
Citazione:
K. Mayer et al., "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana", NATURE, 402(6763), 1999, pp. 769

Abstract

The higher plant Arabidopsis thaliana (Arabidopsis) is an important model for identifying plant genes and determining their function. To assist biological investigations and to define chromosome structure, a coordinated effort to sequence the Arabidopsis genome was initiated in late 1996, Here we report one of the first milestones of this project, the sequence of chromosome 4. Analysis of 17.38 megabases of unique sequence, representing about 17% of the genome, reveals 3,744 protein coding genes, 81 transfer RNAs and numerous repeat elements. Heterochromatic regions surrounding the putative centromere, which has not yet been completely sequenced, are characterized by an increased frequency of a variety of repeats, new repeats, reduced recombination, lowered gene density and lowered gene expression. Roughly 60% ofthe predicted protein-coding genes have been functionally characterized onthe basis of their homology to known genes. Many genes encode predicted proteins that are homologous to human and Caenorhabditis elegans proteins.

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Documento generato il 30/11/20 alle ore 20:03:19