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Titolo:
HOMSTRAD - A DATABASE OF PROTEIN-STRUCTURE ALIGNMENTS FOR HOMOLOGOUS FAMILIES
Autore:
MIZUGUCHI K; DEANE CM; BLUNDELL TL; OVERINGTON JP;
Indirizzi:
UNIV CAMBRIDGE,DEPT BIOCHEM,80 TENNIS COURT RD CAMBRIDGE CB2 1GA ENGLAND UNIV CAMBRIDGE,DEPT BIOCHEM CAMBRIDGE CB2 1GA ENGLAND PFIZER LTD,CENT RES,COMPUTAT CHEM & PROT CRYSTALLOG SANDWICH CT13 9NJKENT ENGLAND
Titolo Testata:
Protein science
fascicolo: 11, volume: 7, anno: 1998,
pagine: 2469 - 2471
SICI:
0961-8368(1998)7:11<2469:H-ADOP>2.0.ZU;2-T
Fonte:
ISI
Lingua:
ENG
Soggetto:
ACID SUBSTITUTION TABLES; DATA-BANK; TEMPLATES; CLASSIFICATION; PREDICTION; FOLDS;
Keywords:
COMPARATIVE MODELING; DATABASE; PROTEIN STRUCTURE ALIGNMENTS; WORLD WIDE WEB;
Tipo documento:
Article
Natura:
Periodico
Settore Disciplinare:
Science Citation Index Expanded
Citazioni:
17
Recensione:
Indirizzi per estratti:
Citazione:
K. Mizuguchi et al., "HOMSTRAD - A DATABASE OF PROTEIN-STRUCTURE ALIGNMENTS FOR HOMOLOGOUS FAMILIES", Protein science, 7(11), 1998, pp. 2469-2471

Abstract

We describe a database of protein structure alignments for homologousfamilies. The database HOMSTRAD presently contains 130 protein families and 590 aligned structures, which have been selected on the basis of quality of the X-ray analysis and accuracy of the structure. For each family, the database provides a structure-based alignment derived using COMPARER and annotated with JOY in a special format that represents the local structural environment of each amino acid residue. HOMSTRAD also provides a set of superposed atomic coordinates obtained using MNYFIT which can be viewed with a graphical user interface or used forcomparative modeling studies. The database is freely available on theWorld Wide Web at: http://www-cryst.bioc.cam. ac.uk/similar to homstrad/, with search facilities and links to other databases.

ASDD Area Sistemi Dipartimentali e Documentali, Università di Bologna, Catalogo delle riviste ed altri periodici
Documento generato il 01/12/20 alle ore 07:33:09